Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.202782
Pex16
peroxisome biogenesis factor 16
2
18633
Gene Ontology
peroxisome organization and biogenesis
Human Homolog
PEX16[peroxisomal biogenesis factor 16]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 67 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGATCTTTG (
6
)
34.3
0.0343
P8 Cb GC
AGGGGCCTTG (
3
)
4.9
0.0049
P8 Cb GC
TGCTGTGCTC
(
3
)
3.3
0.0033
Cb medulloblastoma
TGCTGTGCTC
(
3
)
11.6
0.0116
Cb medulloblastoma
CAGATCTTTG (
6
)
9.2
0.0092
Cb medulloblastoma
AGGGGCCTTG (
3
)
4.6
0.0046
Cb medulloblastoma
GAGATGGGGG (
7
)
4.6
0.0046
Cb medulloblastoma
TCCTGTTGAT (
3
)
2.3
0.0023
P8 GC+1d culture
CAGATCTTTG (
6
)
41.1
0.0411
P8 GC+1d culture
AGGGGCCTTG (
3
)
5.7
0.0057
P8 GC+1d culture
TCCTGTTGAT (
3
)
2.3
0.0023
P8 GC+1d culture
TGCTGTGCTC
(
3
)
2.3
0.0023
P8 GC+1d culture
GAGATGGGGG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGATCTTTG (
6
)
42.2
0.0422
P8 GC+SHH+1d culture
TGCTGTGCTC
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
AGGGGCCTTG (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGATGGGGG (
7
)
1.2
0.0012
3T3 fibroblasts
CAGATCTTTG (
6
)
7
0.007
E15 cortex
CAGATCTTTG (
6
)
24.7
0.0247
E15 cortex
AGGGGCCTTG (
3
)
4.9
0.0049
P1 cortex
CAGATCTTTG (
6
)
40.9
0.0409
P1 cortex
AGGGGCCTTG (
3
)
4.5
0.0045
P1 cortex
TGCTGTGCTC
(
3
)
4.5
0.0045
Hypothalamus
CAGATCTTTG (
6
)
14.5
0.0145
Hypothalamus
AGGGGCCTTG (
3
)
3.6
0.0036
Hypothalamus
GAGATGGGGG (
7
)
3.6
0.0036
E12.5 retina
CAGATCTTTG (
6
)
26.3
0.0263
E12.5 retina
AGGGGCCTTG (
3
)
5.6
0.0056
E12.5 retina
TCCTGTTGAT (
3
)
3.8
0.0038
E12.5 retina
GAGATGGGGG (
7
)
1.9
0.0019
E12.5 retina
TGCTGTGCTC
(
3
)
1.9
0.0019
E14.5 retina
CAGATCTTTG (
6
)
10.9
0.0109
E14.5 retina
AGGGGCCTTG (
3
)
5.5
0.0055
E14.5 retina
GCACAGCCCG (
2
)
1.8
0.0018
E14.5 retina
TGCTGTGCTC
(
3
)
1.8
0.0018
E16.5 retina
CAGATCTTTG (
6
)
19.9
0.0199
E16.5 retina
GCACAGCCCG (
2
)
5.4
0.0054
E16.5 retina
TGCTGTGCTC
(
3
)
3.6
0.0036
E16.5 retina
GAGATGGGGG (
7
)
1.8
0.0018
E18.5 retina
CAGATCTTTG (
6
)
12.7
0.0127
E18.5 retina
TGCTGTGCTC
(
3
)
5.5
0.0055
E18.5 retina
GAGATGGGGG (
7
)
3.6
0.0036
E18.5 retina
AGGGGCCTTG (
3
)
1.8
0.0018
P0.5 retina
CAGATCTTTG (
6
)
35.3
0.0353
P0.5 retina
AGGGGCCTTG (
3
)
7.9
0.0079
P0.5 retina
TGCTGTGCTC
(
3
)
3.9
0.0039
P2.5 retina
CAGATCTTTG (
6
)
26.4
0.0264
P2.5 retina
AGGGGCCTTG (
3
)
3.5
0.0035
P2.5 retina
TGCTGTGCTC
(
3
)
3.5
0.0035
P4.5 retina
CAGATCTTTG (
6
)
7.9
0.0079
P4.5 retina
TGCTGTGCTC
(
3
)
4
0.004
P6.5 retina
CAGATCTTTG (
6
)
23.3
0.0233
P6.5 retina
AGGGGCCTTG (
3
)
6.7
0.0067
P6.5 retina
GAGATGGGGG (
7
)
1.7
0.0017
P6.5 retina
TGCTGTGCTC
(
3
)
1.7
0.0017
P10.5 crx- retina
TGCTGTGCTC
(
3
)
9.3
0.0093
P10.5 crx- retina
AGGGGCCTTG (
3
)
5.6
0.0056
P10.5 crx- retina
CAGATCTTTG (
6
)
3.7
0.0037
P10.5 crx+ retina
CAGATCTTTG (
6
)
9.6
0.0096
P10.5 crx+ retina
AGGGGCCTTG (
3
)
5.8
0.0058
P10.5 crx+ retina
TGCTGTGCTC
(
3
)
3.8
0.0038
Adult retinal
CAGATCTTTG (
6
)
25.9
0.0259
Adult retinal
AGGGGCCTTG (
3
)
5.6
0.0056
Adult retinal
TGCTGTGCTC
(
3
)
5.6
0.0056
ONL
CAGATCTTTG (
6
)
19.2
0.0192
ONL
AGGGGCCTTG (
3
)
3.8
0.0038
ONL
TGCTGTGCTC
(
3
)
1.9
0.0019
