Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.202966
Tbl1xr1
transducin (beta)-like 1X-linked receptor 1
3
81004
Mm.202966
A630076E03Rik
RIKEN cDNA A630076E03 gene
3
320777
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
GTCCAGGAAA (
4
)
3.3
0.0033
P8 Cb GC
CTTCTTTAAA
(
2
)
1.6
0.0016
P8 Cb GC
GGCTGGTTTA (
2
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
GTCCAGGAAA (
4
)
1.1
0.0011
P8 GC+1d culture
TCAATGACAC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
GTCCAGGAAA (
4
)
17.6
0.0176
P8 GC+SHH+1d culture
CTTCTTTAAA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TCACTCTCTA
(
4
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GTCCAGGAAA (
4
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
GGAAAAGTGC (
3
)
1.8
0.0018
Hypothalamus
GTCCAGGAAA (
4
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GTCCAGGAAA (
4
)
92
0.092
E14.5 retina
GTCCAGGAAA (
4
)
195
0.195
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
GGAAAAGTGC (
3
)
1.8
0.0018
E14.5 retina
GTCCAGAAAA
(
2
)
1.8
0.0018
E14.5 retina
TCAATGACAC
(
2
)
1.8
0.0018
E14.5 retina
TCACTCTCTA
(
4
)
1.8
0.0018
E16.5 retina
GTCCAGGAAA (
4
)
163
0.163
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GTCCAGAAAA
(
2
)
3.6
0.0036
E16.5 retina
TCAATGACAC
(
2
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GTCCAGGAAA (
4
)
296.5
0.2965
E18.5 retina
GTCCAGAAAA
(
2
)
1.8
0.0018
P0.5 retina
GTCCAGGAAA (
4
)
149.2
0.1492
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
GTCCAGAAAA
(
2
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GTCCAGGAAA (
4
)
188.3
0.1883
P2.5 retina
GTCCAGAAAA
(
2
)
3.5
0.0035
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GTCCAGGAAA (
4
)
59.4
0.0594
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GTCCAGGAAA (
4
)
8.3
0.0083
P6.5 retina
TCAATGACAC
(
2
)
1.7
0.0017
P6.5 retina
TCACTCTCTA
(
4
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GTCCAGGAAA (
4
)
3.7
0.0037
P10.5 crx- retina
CTTCTTTAAA
(
2
)
1.9
0.0019
P10.5 crx- retina
GGCTGGTTTA (
2
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
ATAAAGTATT
(
3
)
1.9
0.0019
P10.5 crx+ retina
TCAATGACAC
(
2
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
GTCCAGGAAA (
4
)
7.7
0.0077
ONL
GGCTGGTTTA (
2
)
1.9
0.0019
ONL
GTCCAGAAAA
(
2
)
1.9
0.0019
ONL
TCAATGACAC
(
2
)
1.9
0.0019
