Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.203125
2700050F09Rik
RIKEN cDNA 2700050F09 gene
5
72587
Human Homolog
PAN3[PABP1-dependent poly A-specific ribonuclease subunit PAN3]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 66 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTTTTTTCC (
11
)
11.4
0.0114
P8 Cb GC
TCGCGTCGCT
(
2
)
1.6
0.0016
Cb medulloblastoma
TTTTTTTTCC (
11
)
4.6
0.0046
Cb medulloblastoma
GGAAGAAAGG (
4
)
2.3
0.0023
Cb medulloblastoma
TCGCGTCGCT
(
2
)
2.3
0.0023
Cb medulloblastoma
TGACCAAGCC (
8
)
2.3
0.0023
P8 GC+1d culture
GGAAGAAAGG (
4
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTCC (
11
)
2.3
0.0023
P8 GC+1d culture
TATTTGAGGA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GGAAGAAAGG (
4
)
5.9
0.0059
P8 GC+SHH+1d culture
TTTTTTTTCC (
11
)
5.9
0.0059
P8 GC+SHH+1d culture
TCGCGTCGCT
(
2
)
1.2
0.0012
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
TCGCGTCGCT
(
2
)
7
0.007
3T3 fibroblasts
TATTTGAGGA
(
3
)
3.5
0.0035
3T3 fibroblasts
TTTTTTTTCC (
11
)
3.5
0.0035
E15 cortex
TCGCGTCGCT
(
2
)
14.8
0.0148
E15 cortex
GGAAGAAAGG (
4
)
4.9
0.0049
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
ATTTCAAGGG
4.5
0.0045
Hypothalamus
TTTTTTTTCC (
11
)
12.7
0.0127
E12.5 retina
GGAAGAAAGG (
4
)
11.3
0.0113
E12.5 retina
ATTTCAAGGG
1.9
0.0019
E12.5 retina
TCGCGTCGCT
(
2
)
1.9
0.0019
E12.5 retina
TGACCAAGCC (
8
)
1.9
0.0019
E12.5 retina
TTTTTTTTCC (
11
)
1.9
0.0019
E14.5 retina
TTTTTTTTCC (
11
)
18.2
0.0182
E14.5 retina
ATTTCAAGGG
1.8
0.0018
E14.5 retina
GGAAGAAAGG (
4
)
1.8
0.0018
E16.5 retina
TTTTTTTTCC (
11
)
36.2
0.0362
E16.5 retina
GGAAGAAAGG (
4
)
10.9
0.0109
E16.5 retina
TCGCGTCGCT
(
2
)
3.6
0.0036
E18.5 retina
TTTTTTTTCC (
11
)
21.8
0.0218
E18.5 retina
ATTTCAAGGG
1.8
0.0018
E18.5 retina
GGAAGAAAGG (
4
)
1.8
0.0018
E18.5 retina
TGACCAAGCC (
8
)
1.8
0.0018
P0.5 retina
ATTTCAAGGG
3.9
0.0039
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
TCGCGTCGCT
(
2
)
3.9
0.0039
P0.5 retina
TTTTTTTTCC (
11
)
3.9
0.0039
P0.5 retina
TATTTGAGGA
(
3
)
2
0.002
P0.5 retina
TGACCAAGCC (
8
)
2
0.002
P2.5 retina
TTTTTTTTCC (
11
)
5.3
0.0053
P2.5 retina
TCGCGTCGCT
(
2
)
3.5
0.0035
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
TGACCAAGCC (
8
)
1.8
0.0018
P4.5 retina
TTTTTTTTCC (
11
)
9.9
0.0099
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P4.5 retina
TCGCGTCGCT
(
2
)
2
0.002
P6.5 retina
ATTTCAAGGG
3.3
0.0033
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
TCGCGTCGCT
(
2
)
3.3
0.0033
P6.5 retina
TTTTTTTTCC (
11
)
3.3
0.0033
P10.5 crx- retina
TCGCGTCGCT
(
2
)
7.4
0.0074
P10.5 crx- retina
ATTTCAAGGG
1.9
0.0019
P10.5 crx- retina
GGAAGAAAGG (
4
)
1.9
0.0019
P10.5 crx+ retina
TTTTTTTTCC (
11
)
3.8
0.0038
P10.5 crx+ retina
TCGCGTCGCT
(
2
)
1.9
0.0019
Adult retinal
TCGCGTCGCT
(
2
)
5.6
0.0056
Adult retinal
GGAAGAAAGG (
4
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
TTTTTTTTCC (
11
)
1.9
0.0019
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
TATTTGAGGA
(
3
)
3.8
0.0038
ONL
GGAAGAAAGG (
4
)
1.9
0.0019
ONL
TTTTTTTTCC (
11
)
1.9
0.0019
