Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.203866	2310047C17Rik	RIKEN cDNA 2310047C17 gene	19		66395
Mm.203866	AA517132	expressed sequence AA517132	19		107091
Mm.203866	1110004P15Rik	RIKEN cDNA 1110004P15 gene	19		107095
Mm.203866	Ahnak	AHNAK nucleoprotein (desmoyokin)	19		11621
Gene Ontology	intercellular junction
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC AAGTTTTCAG (7) 3.3 0.0033 P8 Cb GC AATGTACAAG (6) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma AAGTTTTCAG (7) 9.2 0.0092 Cb medulloblastoma GGGGGGGGTT (9) 4.6 0.0046 Cb medulloblastoma CCAAAAGGAA (5) 2.3 0.0023 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture AAGTTTTCAG (7) 6.8 0.0068 P8 GC+1d culture CCAAAAGGAA (5) 3.4 0.0034 P8 GC+1d culture ATTAAGGAAA (7) 2.3 0.0023 P8 GC+1d culture TACATATATA (12) 2.3 0.0023 P8 GC+1d culture AATGTACAAG (6) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture AAGTTTTCAG (7) 5.9 0.0059 P8 GC+SHH+1d culture CCAAAAGGAA (5) 3.5 0.0035 P8 GC+SHH+1d culture AATGTACAAG (6) 1.2 0.0012 P8 GC+SHH+1d culture TACATATATA (12) 1.2 0.0012 3T3 fibroblasts AATGTACAAG (6) 35 0.035 3T3 fibroblasts CTACAGAGAT (4) 14 0.014 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex AAGTTTTCAG (7) 14.8 0.0148 E15 cortex ATTAAGGAAA (7) 4.9 0.0049 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex CCAAAAGGAA (5) 9.1 0.0091 P1 cortex TACATATATA (12) 9.1 0.0091 P1 cortex AAGTTTTCAG (7) 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus AAGTTTTCAG (7) 3.6 0.0036 Hypothalamus CCAAAAGGAA (5) 3.6 0.0036 Hypothalamus AATGTACAAG (6) 1.8 0.0018 Hypothalamus GGGGGGGGTT (9) 1.8 0.0018 Hypothalamus TTTTCTAAAA (5) 1.8 0.0018 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina AAGTTTTCAG (7) 11.3 0.0113 E12.5 retina CCAAAAGGAA (5) 9.4 0.0094 E14.5 retina AAGTTTTCAG (7) 29.2 0.0292 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina TCCTAAAGTG (4) 9.1 0.0091 E16.5 retina AAGTTTTCAG (7) 19.9 0.0199 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina TACATATATA (12) 1.8 0.0018 E16.5 retina TTTTCTAAAA (5) 1.8 0.0018 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina AAGTTTTCAG (7) 3.6 0.0036 E18.5 retina TTTTCTAAAA (5) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina ATTAAGGAAA (7) 3.9 0.0039 P0.5 retina AAGTTTTCAG (7) 2 0.002 P0.5 retina CCAAAAGGAA (5) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina AAGTTTTCAG (7) 7 0.007 P2.5 retina CCAAAAGGAA (5) 1.8 0.0018 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina AAGTTTTCAG (7) 5.9 0.0059 P4.5 retina AATGTACAAG (6) 2 0.002 P4.5 retina ATTAAGGAAA (7) 2 0.002 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina AAGTTTTCAG (7) 6.7 0.0067 P6.5 retina CCAAAAGGAA (5) 3.3 0.0033 P6.5 retina AATGTACAAG (6) 1.7 0.0017 P10.5 crx- retina AAGTTTTCAG (7) 16.7 0.0167 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina AATGTACAAG (6) 3.7 0.0037 P10.5 crx- retina CCAAAAGGAA (5) 3.7 0.0037 P10.5 crx- retina ATTAAGGAAA (7) 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina CCAAAAGGAA (5) 5.8 0.0058 P10.5 crx+ retina AAGTTTTCAG (7) 3.8 0.0038 P10.5 crx+ retina AATGTACAAG (6) 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal AAGTTTTCAG (7) 5.6 0.0056 Adult retinal CCAAAAGGAA (5) 5.6 0.0056 Adult retinal AATGTACAAG (6) 1.9 0.0019 Adult retinal CTACAGAGAT (4) 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL AAGTTTTCAG (7) 3.8 0.0038 ONL GGGGGGGGTT (9) 1.9 0.0019