Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20396	Crat	carnitine acetyltransferase	2	2 18.0 cM	12908
Gene Ontology	acyltransferase activity | carnitine O-acetyltransferase activity | fatty acid metabolism | mitochondrion | peroxisome | transferase activity | transport
Human Homolog	CRAT[carnitine acetyltransferase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAGACGCGG (3) 9.8 0.0098 P8 Cb GC GCAGTTTTTA (2) 1.6 0.0016 P8 Cb GC GTGGTATAAT 1.6 0.0016 Cb medulloblastoma CAGCTGCAGA (3) 2.3 0.0023 Cb medulloblastoma CCTCCACCCA (7) 2.3 0.0023 Cb medulloblastoma GAGTATACAA (3) 2.3 0.0023 Cb medulloblastoma GCAGTTTTTA (2) 2.3 0.0023 Cb medulloblastoma GTGGTATAAT 2.3 0.0023 P8 GC+1d culture GTGGTATAAT 3.4 0.0034 P8 GC+1d culture CAGCTGCAGA (3) 1.1 0.0011 P8 GC+1d culture GAGTATACAA (3) 1.1 0.0011 P8 GC+SHH+1d culture TCAGACGCGG (3) 2.3 0.0023 P8 GC+SHH+1d culture CAGCTGCAGA (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGGTATAAT 1.2 0.0012 3T3 fibroblasts TCAGACGCGG (3) 14 0.014 3T3 fibroblasts CCTCCACCCA (7) 7 0.007 3T3 fibroblasts GTGGTATAAT 3.5 0.0035 E15 cortex TCAGACGCGG (3) 69.3 0.0693 E15 cortex CCAGGCACTC (2) 9.9 0.0099 E15 cortex TGCAGGGCTG (2) 4.9 0.0049 Hypothalamus CAGCTGCAGA (3) 3.6 0.0036 Hypothalamus GTGGTATAAT 3.6 0.0036 Hypothalamus GAGTATACAA (3) 1.8 0.0018 E12.5 retina TCAGACGCGG (3) 1.9 0.0019 E14.5 retina CACCTGCAGA (2) 7.3 0.0073 E14.5 retina CCAGGCACTC (2) 1.8 0.0018 E14.5 retina TCAGACGCGG (3) 1.8 0.0018 E16.5 retina GTGGTATAAT 1.8 0.0018 E16.5 retina TCAGACGCGG (3) 1.8 0.0018 E18.5 retina TCAGACGCGG (3) 3.6 0.0036 E18.5 retina TGTCCTGGAA (5) 1.8 0.0018 P0.5 retina TCAGACGCGG (3) 3.9 0.0039 P0.5 retina CCTCCACCCA (7) 2 0.002 P2.5 retina GTGGTATAAT 3.5 0.0035 P4.5 retina TCAGACGCGG (3) 2 0.002 P6.5 retina GTGGTATAAT 3.3 0.0033 P6.5 retina TGTCCTGGAA (5) 3.3 0.0033 P6.5 retina CACCTGCAGA (2) 1.7 0.0017 P6.5 retina CCTCCACCCA (7) 1.7 0.0017 P10.5 crx- retina GTGGTATAAT 3.7 0.0037 P10.5 crx- retina CAGCTGCAGA (3) 1.9 0.0019 P10.5 crx- retina GAGTATACAA (3) 1.9 0.0019 P10.5 crx+ retina CAGCTGCAGA (3) 3.8 0.0038 P10.5 crx+ retina GAGTATACAA (3) 1.9 0.0019 P10.5 crx+ retina GCAGTTTTTA (2) 1.9 0.0019 Adult retinal CCTCCACCCA (7) 3.7 0.0037 Adult retinal TGCAGGGCTG (2) 1.9 0.0019 ONL GAGTATACAA (3) 5.7 0.0057 ONL TGCAGGGCTG (2) 5.7 0.0057 ONL CCTCCACCCA (7) 3.8 0.0038