Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.205045	Ddx41	DEAD (Asp-Glu-Ala-Asp) box polypeptide 41	13		72935
Gene Ontology	apoptosis | ATP binding | ATP dependent helicase activity | development | helicase activity | hydrolase activity | nucleic acid binding | nucleus | regulation of cell shape | RNA binding | RNA processing
Human Homolog	DDX41[DEAD (Asp-Glu-Ala-Asp) box polypeptide 41]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGAATGAT (9) 9.8 0.0098 P8 Cb GC TGCACACCAG (4) 8.2 0.0082 P8 Cb GC TGCACACAGG (4) 1.6 0.0016 Cb medulloblastoma TGTGAATGAT (9) 23.1 0.0231 Cb medulloblastoma TGCACACCAG (4) 2.3 0.0023 P8 GC+1d culture TGTGAATGAT (9) 17.1 0.0171 P8 GC+1d culture TGCACACCAG (4) 5.7 0.0057 P8 GC+1d culture TCTGCCTGGA (2) 2.3 0.0023 P8 GC+1d culture TCTGCTGGAC (2) 2.3 0.0023 P8 GC+1d culture TTCCTGCCTG (3) 2.3 0.0023 P8 GC+1d culture GAGCTGTGGG (3) 1.1 0.0011 P8 GC+SHH+1d culture TGTGAATGAT (9) 16.4 0.0164 P8 GC+SHH+1d culture TGCACACCAG (4) 1.2 0.0012 P8 GC+SHH+1d culture TTCCTGCCTG (3) 1.2 0.0012 3T3 fibroblasts TGCACACAGG (4) 3.5 0.0035 3T3 fibroblasts TGCACACCAG (4) 3.5 0.0035 3T3 fibroblasts TTCCTGCCTG (3) 3.5 0.0035 E15 cortex TGCACACCAG (4) 4.9 0.0049 E15 cortex TGTGAATGAT (9) 4.9 0.0049 P1 cortex TGTGAATGAT (9) 9.1 0.0091 Hypothalamus TGTGAATGAT (9) 21.7 0.0217 Hypothalamus TGCACACCAG (4) 3.6 0.0036 E12.5 retina TGTGAATGAT (9) 11.3 0.0113 E12.5 retina TGCACACCAG (4) 7.5 0.0075 E12.5 retina TCTGCTGGAC (2) 1.9 0.0019 E12.5 retina TTCCTGCCTG (3) 1.9 0.0019 E14.5 retina TCTGCCTGGA (2) 9.1 0.0091 E14.5 retina TGTGAATGAT (9) 3.6 0.0036 E14.5 retina TTCCTGCCTG (3) 3.6 0.0036 E14.5 retina TGCACACAGG (4) 1.8 0.0018 E14.5 retina TGCACACCAG (4) 1.8 0.0018 E16.5 retina TGTGAATGAT (9) 14.5 0.0145 E16.5 retina TTCCTGCCTG (3) 3.6 0.0036 E16.5 retina GAGCTGTGGG (3) 1.8 0.0018 E16.5 retina TCTGCTGGAC (2) 1.8 0.0018 E16.5 retina TGCACACCAG (4) 1.8 0.0018 E18.5 retina TGTGAATGAT (9) 14.6 0.0146 E18.5 retina TGCACACCAG (4) 5.5 0.0055 E18.5 retina TCTGCCTGGA (2) 1.8 0.0018 P0.5 retina TGTGAATGAT (9) 15.7 0.0157 P0.5 retina TTCCTGCCTG (3) 3.9 0.0039 P0.5 retina TCTGCCTGGA (2) 2 0.002 P0.5 retina TGCACACCAG (4) 2 0.002 P2.5 retina TGTGAATGAT (9) 19.4 0.0194 P2.5 retina TGCACACCAG (4) 5.3 0.0053 P4.5 retina TGTGAATGAT (9) 27.7 0.0277 P4.5 retina TGCACACCAG (4) 5.9 0.0059 P4.5 retina TTCCTGCCTG (3) 2 0.002 P6.5 retina TGTGAATGAT (9) 18.3 0.0183 P6.5 retina TTCCTGCCTG (3) 3.3 0.0033 P6.5 retina TCTGCCTGGA (2) 1.7 0.0017 P6.5 retina TGCACACCAG (4) 1.7 0.0017 P10.5 crx- retina TGTGAATGAT (9) 14.9 0.0149 P10.5 crx- retina TCTGCTGGAC (2) 1.9 0.0019 P10.5 crx+ retina TGTGAATGAT (9) 21.1 0.0211 P10.5 crx+ retina TGCACACCAG (4) 7.7 0.0077 P10.5 crx+ retina TCTGCCTGGA (2) 1.9 0.0019 Adult retinal TGTGAATGAT (9) 5.6 0.0056 Adult retinal GAGCTGTGGG (3) 3.7 0.0037 Adult retinal TGCACACCAG (4) 3.7 0.0037 Adult retinal TTCCTGCCTG (3) 1.9 0.0019 ONL TGTGAATGAT (9) 11.5 0.0115 ONL TCTGCCTGGA (2) 1.9 0.0019