Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.205169
1110039B18Rik
RIKEN cDNA 1110039B18 gene
5
68796
Mm.205169
4921530J21Rik
RIKEN cDNA 4921530J21 gene
5
100742
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGACAGCCT
(
2
)
3.3
0.0033
P8 Cb GC
ATTGGCCCCA
(
4
)
1.6
0.0016
P8 Cb GC
GCACTTGCTG (
3
)
1.6
0.0016
P8 Cb GC
TGGACAGGCT (
4
)
1.6
0.0016
Cb medulloblastoma
ATTGGCCCCA
(
4
)
87.9
0.0879
Cb medulloblastoma
CAGCCACACC (
5
)
2.3
0.0023
Cb medulloblastoma
TGGACAGCCT
(
2
)
2.3
0.0023
P8 GC+1d culture
TGGACAGCCT
(
2
)
2.3
0.0023
P8 GC+1d culture
ATTGGCCCCA
(
4
)
1.1
0.0011
P8 GC+1d culture
TGGACAGGCT (
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGACAGCCT
(
2
)
3.5
0.0035
3T3 fibroblasts
TGGACAGCCT
(
2
)
14
0.014
E15 cortex
TGGACAGCCT
(
2
)
9.9
0.0099
Hypothalamus
ATTGGCCCCA
(
4
)
85.1
0.0851
Hypothalamus
TGGACAGCCT
(
2
)
3.6
0.0036
E12.5 retina
TGGACAGCCT
(
2
)
3.8
0.0038
E14.5 retina
ATTGGCCCCA
(
4
)
1.8
0.0018
E14.5 retina
GCACTTGCTG (
3
)
1.8
0.0018
E14.5 retina
TGGACAGCCT
(
2
)
1.8
0.0018
E16.5 retina
ATTGGCCCCA
(
4
)
5.4
0.0054
E18.5 retina
ATTGGCCCCA
(
4
)
9.1
0.0091
E18.5 retina
TGGACAGCCT
(
2
)
1.8
0.0018
E18.5 retina
TGGACAGGCT (
4
)
1.8
0.0018
P0.5 retina
TGGACAGCCT
(
2
)
7.9
0.0079
P0.5 retina
TGGGCCCTGG (
8
)
2
0.002
P2.5 retina
ATTGGCCCCA
(
4
)
19.4
0.0194
P2.5 retina
TGGACAGCCT
(
2
)
1.8
0.0018
P2.5 retina
TGGACAGGCT (
4
)
1.8
0.0018
P4.5 retina
ATTGGCCCCA
(
4
)
35.7
0.0357
P6.5 retina
ATTGGCCCCA
(
4
)
116.7
0.1167
P6.5 retina
CAGCCACACC (
5
)
1.7
0.0017
P6.5 retina
TGGACAGCCT
(
2
)
1.7
0.0017
P10.5 crx- retina
ATTGGCCCCA
(
4
)
46.4
0.0464
P10.5 crx- retina
TGGACAGCCT
(
2
)
3.7
0.0037
P10.5 crx- retina
TGGGCCCTGG (
8
)
1.9
0.0019
P10.5 crx+ retina
ATTGGCCCCA
(
4
)
211.5
0.2115
P10.5 crx+ retina
TGGACAGCCT
(
2
)
3.8
0.0038
P10.5 crx+ retina
GCACTTGCTG (
3
)
1.9
0.0019
P10.5 crx+ retina
TGGGCCCTGG (
8
)
1.9
0.0019
Adult retinal
ATTGGCCCCA
(
4
)
124.1
0.1241
Adult retinal
TGGACAGCCT
(
2
)
3.7
0.0037
Adult retinal
CAGCCACACC (
5
)
1.9
0.0019
ONL
ATTGGCCCCA
(
4
)
82.4
0.0824
ONL
TGGACAGCCT
(
2
)
3.8
0.0038
ONL
TGGGCCCTGG (
8
)
1.9
0.0019
