Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.205601	Cttn	cortactin	7	13 31.0 cM	13043
Gene Ontology	cell cortex | cytoplasm | cytoskeleton | lamellipodium | protein binding
Human Homolog	CTTN[cortactin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGACTATGT (4) 6.5 0.0065 P8 Cb GC ACTCATCAGA (2) 3.3 0.0033 P8 Cb GC AGGATCAATG (3) 3.3 0.0033 P8 Cb GC ACGAGGCTGG (2) 1.6 0.0016 Cb medulloblastoma CAGACTATGT (4) 6.9 0.0069 Cb medulloblastoma AGGATCAATG (3) 2.3 0.0023 Cb medulloblastoma TGTTTGTGTG (10) 2.3 0.0023 P8 GC+1d culture CAGACTATGT (4) 10.3 0.0103 P8 GC+1d culture AGGATCAATG (3) 9.1 0.0091 P8 GC+1d culture ACTCATCAGA (2) 4.6 0.0046 P8 GC+1d culture CCCCGAAGCA 1.1 0.0011 P8 GC+1d culture TTTCCCAGAG 1.1 0.0011 P8 GC+SHH+1d culture CAGACTATGT (4) 16.4 0.0164 P8 GC+SHH+1d culture GAGGGACCCA (2) 7 0.007 P8 GC+SHH+1d culture ACTCATCAGA (2) 4.7 0.0047 P8 GC+SHH+1d culture AGGATCAATG (3) 4.7 0.0047 3T3 fibroblasts ACGAGGCTGG (2) 63.1 0.0631 3T3 fibroblasts GAGGGACCCA (2) 28 0.028 3T3 fibroblasts AGGATCAATG (3) 3.5 0.0035 3T3 fibroblasts CCCCGAAGCA 3.5 0.0035 E15 cortex ACTCATCAGA (2) 9.9 0.0099 E15 cortex GAGGGACCCA (2) 9.9 0.0099 E15 cortex CCCTCCCCCA (5) 4.9 0.0049 P1 cortex ACTCATCAGA (2) 27.3 0.0273 Hypothalamus TTTCCCAGAG 3.6 0.0036 Hypothalamus ACGAGGCTGG (2) 1.8 0.0018 Hypothalamus ACTCATCAGA (2) 1.8 0.0018 Hypothalamus AGGATCAATG (3) 1.8 0.0018 Hypothalamus CAGACTATGT (4) 1.8 0.0018 Hypothalamus CCCTCCCCCA (5) 1.8 0.0018 Hypothalamus TGTTTGTGTG (10) 1.8 0.0018 E12.5 retina AGGATCAATG (3) 7.5 0.0075 E12.5 retina CAGACTATGT (4) 5.6 0.0056 E12.5 retina ACTCATCAGA (2) 1.9 0.0019 E12.5 retina CCCCGAAGCA 1.9 0.0019 E14.5 retina CAGACTATGT (4) 9.1 0.0091 E14.5 retina GAGGGACCCA (2) 5.5 0.0055 E14.5 retina ACTCATCAGA (2) 3.6 0.0036 E14.5 retina AGGATCAATG (3) 3.6 0.0036 E14.5 retina TGTTTGTGTG (10) 1.8 0.0018 E16.5 retina ACTCATCAGA (2) 7.2 0.0072 E16.5 retina AGGATCAATG (3) 7.2 0.0072 E16.5 retina CAGACTATGT (4) 1.8 0.0018 E18.5 retina AGGATCAATG (3) 5.5 0.0055 E18.5 retina CAGACTATGT (4) 5.5 0.0055 E18.5 retina ACTCATCAGA (2) 3.6 0.0036 P0.5 retina CAGACTATGT (4) 9.8 0.0098 P0.5 retina AGGATCAATG (3) 5.9 0.0059 P0.5 retina CCCTCCCCCA (5) 2 0.002 P0.5 retina GAGGGACCCA (2) 2 0.002 P2.5 retina CAGACTATGT (4) 14.1 0.0141 P2.5 retina AGGATCAATG (3) 3.5 0.0035 P2.5 retina TGTTTGTGTG (10) 1.8 0.0018 P4.5 retina ACTCATCAGA (2) 7.9 0.0079 P4.5 retina AGGATCAATG (3) 5.9 0.0059 P4.5 retina CAGACTATGT (4) 4 0.004 P4.5 retina TGTTTGTGTG (10) 2 0.002 P6.5 retina AGGATCAATG (3) 6.7 0.0067 P6.5 retina CAGACTATGT (4) 5 0.005 P6.5 retina ACTCATCAGA (2) 3.3 0.0033 P6.5 retina TGTTTGTGTG (10) 1.7 0.0017 P10.5 crx- retina ACGAGGCTGG (2) 5.6 0.0056 P10.5 crx- retina AGGATCAATG (3) 5.6 0.0056 P10.5 crx- retina ACTCATCAGA (2) 1.9 0.0019 P10.5 crx- retina CAGACTATGT (4) 1.9 0.0019 P10.5 crx+ retina AGGATCAATG (3) 5.8 0.0058 P10.5 crx+ retina ACGAGGCTGG (2) 1.9 0.0019 P10.5 crx+ retina CAGACTATGT (4) 1.9 0.0019 P10.5 crx+ retina CCCCGAAGCA 1.9 0.0019 Adult retinal AGGATCAATG (3) 5.6 0.0056 Adult retinal CAGACTATGT (4) 1.9 0.0019 ONL AGGATCAATG (3) 3.8 0.0038 ONL GAGGGACCCA (2) 1.9 0.0019