Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.205647	Abi1	abl-interactor 1	2	2 A3 (2 15.0 cM)	11308
Mm.205647	2210402A03Rik	RIKEN cDNA 2210402A03 gene	2		72280
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

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SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAGCCATT (3) 4.9 0.0049 P8 Cb GC TGCAGTATTC (2) 4.9 0.0049 P8 Cb GC TGAAATGAAA (5) 3.3 0.0033 P8 Cb GC CACTTTGTGT (2) 1.6 0.0016 Cb medulloblastoma TTTTATTGGT (5) 9.2 0.0092 Cb medulloblastoma GGGGAAAAAA (28) 4.6 0.0046 Cb medulloblastoma TGAAATGAAA (5) 4.6 0.0046 Cb medulloblastoma TGGGCATTAA (2) 4.6 0.0046 P8 GC+1d culture TGAAATGTGA (7) 3.4 0.0034 P8 GC+1d culture TGCAGTATTC (2) 3.4 0.0034 P8 GC+1d culture TTTTATTGGT (5) 3.4 0.0034 P8 GC+1d culture TAAAGCCATT (3) 2.3 0.0023 P8 GC+1d culture TGGGCATTAA (2) 2.3 0.0023 P8 GC+1d culture CACTTTGTGT (2) 1.1 0.0011 P8 GC+1d culture GGGGAAAAAA (28) 1.1 0.0011 P8 GC+SHH+1d culture TTTTATTGGT (5) 8.2 0.0082 P8 GC+SHH+1d culture TAAAGCCATT (3) 3.5 0.0035 P8 GC+SHH+1d culture TGAAATGAAA (5) 3.5 0.0035 P8 GC+SHH+1d culture TGCAGTATTC (2) 2.3 0.0023 P8 GC+SHH+1d culture TGGGCATTAA (2) 1.2 0.0012 3T3 fibroblasts CACTTGTGTG (4) 3.5 0.0035 3T3 fibroblasts TGGGCATTAA (2) 3.5 0.0035 E15 cortex GGGGAAAAAA (28) 4.9 0.0049 P1 cortex TTTTATTGGT (5) 4.5 0.0045 Hypothalamus TAAAGCCATT (3) 5.4 0.0054 Hypothalamus TTTTATTGGT (5) 5.4 0.0054 Hypothalamus TGAAATGAAA (5) 1.8 0.0018 Hypothalamus TGAAATGTGA (7) 1.8 0.0018 E12.5 retina TAAAGCCATT (3) 5.6 0.0056 E12.5 retina TGCAGTATTC (2) 5.6 0.0056 E12.5 retina CACTTTGTGT (2) 1.9 0.0019 E12.5 retina GGGGAAAAAA (28) 1.9 0.0019 E12.5 retina TGAAATGTGA (7) 1.9 0.0019 E12.5 retina TTTTATTGGT (5) 1.9 0.0019 E14.5 retina TAAAGCCATT (3) 3.6 0.0036 E14.5 retina TTTTATTGGT (5) 3.6 0.0036 E14.5 retina TGAAATGAAA (5) 1.8 0.0018 E14.5 retina TGCAGTATTC (2) 1.8 0.0018 E16.5 retina TAAAGCCATT (3) 5.4 0.0054 E16.5 retina TGAAATGAAA (5) 3.6 0.0036 E16.5 retina TTTTATTGGT (5) 3.6 0.0036 E16.5 retina CACTTTGTGT (2) 1.8 0.0018 E16.5 retina GGGGAAAAAA (28) 1.8 0.0018 E16.5 retina TGCAGTATTC (2) 1.8 0.0018 E18.5 retina GGGGAAAAAA (28) 3.6 0.0036 E18.5 retina TTTTATTGGT (5) 3.6 0.0036 E18.5 retina CACTTTGTGT (2) 1.8 0.0018 E18.5 retina TAAAGCCATT (3) 1.8 0.0018 E18.5 retina TGAAATGAAA (5) 1.8 0.0018 E18.5 retina TGGGCATTAA (2) 1.8 0.0018 P0.5 retina CACTTTGTGT (2) 5.9 0.0059 P0.5 retina TGGGCATTAA (2) 3.9 0.0039 P0.5 retina TAAAGCCATT (3) 2 0.002 P0.5 retina TGAAATGAAA (5) 2 0.002 P0.5 retina TTTTATTGGT (5) 2 0.002 P2.5 retina TGAAATGAAA (5) 7 0.007 P2.5 retina TAAAGCCATT (3) 5.3 0.0053 P2.5 retina TTTTATTGGT (5) 1.8 0.0018 P4.5 retina TAAAGCCATT (3) 5.9 0.0059 P4.5 retina TTTTATTGGT (5) 5.9 0.0059 P4.5 retina TGAAATGAAA (5) 2 0.002 P4.5 retina TGGGCATTAA (2) 2 0.002 P6.5 retina CACTTTGTGT (2) 8.3 0.0083 P6.5 retina TGAAATGAAA (5) 3.3 0.0033 P6.5 retina TGCAGTATTC (2) 3.3 0.0033 P6.5 retina TGGGCATTAA (2) 3.3 0.0033 P6.5 retina GGGGAAAAAA (28) 1.7 0.0017 P6.5 retina TGAAATGTGA (7) 1.7 0.0017 P6.5 retina TTTTATTGGT (5) 1.7 0.0017 P10.5 crx- retina TTTTATTGGT (5) 7.4 0.0074 P10.5 crx- retina CACTTTGTGT (2) 1.9 0.0019 P10.5 crx- retina TAAAGCCATT (3) 1.9 0.0019 P10.5 crx- retina TGAAATGAAA (5) 1.9 0.0019 P10.5 crx+ retina TAAAGCCATT (3) 11.5 0.0115 P10.5 crx+ retina TTTTATTGGT (5) 3.8 0.0038 P10.5 crx+ retina TGAAATGAAA (5) 1.9 0.0019 Adult retinal CACTTGTGTG (4) 9.3 0.0093 Adult retinal CACTTTGTGT (2) 3.7 0.0037 Adult retinal TGAAATGAAA (5) 1.9 0.0019 Adult retinal TGCAGTATTC (2) 1.9 0.0019 Adult retinal TTTTATTGGT (5) 1.9 0.0019 ONL TAAAGCCATT (3) 1.9 0.0019