Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.206238	D5Ertd255e	DNA segment, Chr 5, ERATO Doi 255, expressed	5	5 65.0 cM	52183
Mm.206238	Thrap2	thyroid hormone receptor associated protein 2	5		76199
Gene Ontology	mediator complex | receptor activity | transcription from Pol II promoter
Human Homolog	THRAP2[thyroid hormone receptor associated protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 72 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCCTCCTGC (5) 35.9 0.0359 P8 Cb GC TCCTGGTTAT (3) 3.3 0.0033 P8 Cb GC CCTGTATGTA (2) 1.6 0.0016 P8 Cb GC GAAATACCTT (4) 1.6 0.0016 P8 Cb GC TGAATGTTTA (3) 1.6 0.0016 P8 Cb GC TTAATATAAT (4) 1.6 0.0016 Cb medulloblastoma CCTGTATGTA (2) 2.3 0.0023 P8 GC+1d culture CTCCTCCTGC (5) 25.1 0.0251 P8 GC+1d culture GAAATACCTT (4) 1.1 0.0011 P8 GC+1d culture GGTGACTGTT (3) 1.1 0.0011 P8 GC+SHH+1d culture CTCCTCCTGC (5) 21.1 0.0211 P8 GC+SHH+1d culture TGAAAAAAGA (7) 2.3 0.0023 P8 GC+SHH+1d culture TGAATGTTTA (3) 2.3 0.0023 P8 GC+SHH+1d culture TCCTGGTTAT (3) 1.2 0.0012 3T3 fibroblasts CTCCTCCTGC (5) 49.1 0.0491 3T3 fibroblasts GGTGACTGTT (3) 7 0.007 E15 cortex CTCCTCCTGC (5) 49.5 0.0495 E15 cortex GGTGACTGTT (3) 34.6 0.0346 E15 cortex GAAATACCTT (4) 4.9 0.0049 E15 cortex GTAGGAGTTC (3) 4.9 0.0049 E15 cortex TGAAAAAAGA (7) 4.9 0.0049 P1 cortex CTCCTCCTGC (5) 18.2 0.0182 P1 cortex GTAGGAGTTC (3) 4.5 0.0045 P1 cortex TCCTGGTTAT (3) 4.5 0.0045 Hypothalamus TCCTGGTTAT (3) 1.8 0.0018 E12.5 retina CTCCTCCTGC (5) 24.4 0.0244 E12.5 retina TCCTGGTTAT (3) 3.8 0.0038 E12.5 retina TGACTGTATA (5) 3.8 0.0038 E12.5 retina GAAATACCTT (4) 1.9 0.0019 E12.5 retina GAGCAGTGAG (6) 1.9 0.0019 E12.5 retina TGAATGTTTA (3) 1.9 0.0019 E14.5 retina CTCCTCCTGC (5) 3.6 0.0036 E14.5 retina TCCTGGTTAT (3) 1.8 0.0018 E14.5 retina TGAATGTTTA (3) 1.8 0.0018 E16.5 retina CTCCTCCTGC (5) 9.1 0.0091 E16.5 retina GAAATACCTT (4) 3.6 0.0036 E16.5 retina GAGCAGTGAG (6) 3.6 0.0036 E16.5 retina TCCTGGTTAT (3) 1.8 0.0018 E16.5 retina TGAATGTTTA (3) 1.8 0.0018 E16.5 retina TTAATATAAT (4) 1.8 0.0018 E18.5 retina TCCTGGTTAT (3) 7.3 0.0073 E18.5 retina CTCCTCCTGC (5) 5.5 0.0055 P0.5 retina CTCCTCCTGC (5) 13.7 0.0137 P0.5 retina GTAGGAGTTC (3) 3.9 0.0039 P0.5 retina GAGCAGTGAG (6) 2 0.002 P0.5 retina TCCTGGTTAT (3) 2 0.002 P0.5 retina TGACTGTATA (5) 2 0.002 P2.5 retina CTCCTCCTGC (5) 14.1 0.0141 P2.5 retina GAGCAGTGAG (6) 3.5 0.0035 P2.5 retina TGACTGTATA (5) 3.5 0.0035 P2.5 retina CCTGTATGTA (2) 1.8 0.0018 P2.5 retina TCCTGGTTAT (3) 1.8 0.0018 P4.5 retina CTCCTCCTGC (5) 5.9 0.0059 P4.5 retina TGAATGTTTA (3) 2 0.002 P6.5 retina GAAATACCTT (4) 3.3 0.0033 P6.5 retina CTCCTCCTGC (5) 1.7 0.0017 P6.5 retina GGTGACTGTT (3) 1.7 0.0017 P6.5 retina GTAGGAGTTC (3) 1.7 0.0017 P10.5 crx- retina GTAGGAGTTC (3) 1.9 0.0019 P10.5 crx- retina TGACTGTATA (5) 1.9 0.0019 P10.5 crx+ retina CTCCTCCTGC (5) 3.8 0.0038 P10.5 crx+ retina TTAATATAAT (4) 1.9 0.0019 Adult retinal TCCTGGTTAT (3) 5.6 0.0056 Adult retinal CCTGTATGTA (2) 3.7 0.0037 Adult retinal TGAATGTTTA (3) 3.7 0.0037 Adult retinal GTAGGAGTTC (3) 1.9 0.0019 Adult retinal TGACTGTATA (5) 1.9 0.0019 ONL TCCTGGTTAT (3) 3.8 0.0038 ONL CCTGTATGTA (2) 1.9 0.0019 ONL CTCCTCCTGC (5) 1.9 0.0019 ONL GAAATACCTT (4) 1.9 0.0019 ONL TGACTGTATA (5) 1.9 0.0019