Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.206371
C230052J16Rik
RIKEN cDNA C230052J16 gene
2
320066
Mm.206371
AU024582
expressed sequence AU024582
2
227648
Human Homolog
KIAA0310[KIAA0310]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 52 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
GTGAAACCAA (
4
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
GGAGAACACA (
3
)
4.6
0.0046
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
GTGAAACCAA (
4
)
2.3
0.0023
P8 GC+1d culture
GAATTAGTAC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
GGAGAACACA (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGAAACCAA (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTCTTTTTT (
8
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
CAGCGATTCA (
3
)
1.8
0.0018
Hypothalamus
TGATGATCAC (
6
)
1.8
0.0018
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
AGTTTAAGGC
(
6
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
CAGCGATTCA (
3
)
1.8
0.0018
E16.5 retina
GAATTAGTAC
(
2
)
1.8
0.0018
E16.5 retina
TGATGATCAC (
6
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
CAGCGATTCA (
3
)
1.8
0.0018
E18.5 retina
TGATGATCAC (
6
)
1.8
0.0018
E18.5 retina
TTTCTTTTTT (
8
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
AGTTTAAGGC
(
6
)
2
0.002
P0.5 retina
GAATTAGTAC
(
2
)
2
0.002
P0.5 retina
GGAGAACACA (
3
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
AGTTTAAGGC
(
6
)
3.5
0.0035
P2.5 retina
CAGCGATTCA (
3
)
1.8
0.0018
P2.5 retina
GGAGAACACA (
3
)
1.8
0.0018
P2.5 retina
TGATGATCAC (
6
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
GTGAAACCAA (
4
)
4
0.004
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
CAGCGATTCA (
3
)
1.7
0.0017
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
GGAGAACACA (
3
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
AGTTTAAGGC
(
6
)
1.9
0.0019
P10.5 crx+ retina
GAATTAGTAC
(
2
)
1.9
0.0019
P10.5 crx+ retina
GTGAAACCAA (
4
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
GGAGAACACA (
3
)
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
AGTTTAAGGC
(
6
)
1.9
0.0019
ONL
GGAGAACACA (
3
)
1.9
0.0019
