Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.206404	Eif3s6ip	eukaryotic translation initiation factor 3, subunit 6 interacting protein	15		223691
Gene Ontology	fibrillar center | nucleolus | nucleoplasm | protein binding | protein folding | response to unfolded protein | translation initiation factor activity
Human Homolog	EIF3S6IP[eukaryotic translation initiation factor 3, subunit 6 interacting protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGGTGGGCA (9) 1.6 0.0016 P8 Cb GC GACCAGAAGG (6) 1.6 0.0016 P8 Cb GC TGGTCATCTG (2) 1.6 0.0016 Cb medulloblastoma CTGGTGGGCA (9) 4.6 0.0046 Cb medulloblastoma ATCCATATTG (3) 2.3 0.0023 P8 GC+1d culture CTGGTGGGCA (9) 12.6 0.0126 P8 GC+1d culture ATCCATATTG (3) 5.7 0.0057 P8 GC+1d culture GACCAGAAGG (6) 1.1 0.0011 P8 GC+1d culture GTGGTGTAGA 1.1 0.0011 P8 GC+1d culture TCCTGATCAA (3) 1.1 0.0011 P8 GC+1d culture TGGTCATCTG (2) 1.1 0.0011 P8 GC+SHH+1d culture CTGGTGGGCA (9) 4.7 0.0047 P8 GC+SHH+1d culture ACTAGTGCTT (80) 1.2 0.0012 P8 GC+SHH+1d culture ATCCATATTG (3) 1.2 0.0012 3T3 fibroblasts ATCCATATTG (3) 7 0.007 3T3 fibroblasts CTGGTGGGCA (9) 7 0.007 E15 cortex ATCCATATTG (3) 19.8 0.0198 E15 cortex CTGGTGGGCA (9) 4.9 0.0049 E15 cortex GCGTCTGGGA (3) 4.9 0.0049 E15 cortex TGGTCATCTG (2) 4.9 0.0049 P1 cortex CTGGTGGGCA (9) 22.7 0.0227 Hypothalamus CTGGTGGGCA (9) 7.2 0.0072 Hypothalamus TTGGCAATGA (2) 7.2 0.0072 Hypothalamus GCGTCTGGGA (3) 1.8 0.0018 E12.5 retina ACTAGTGCTT (80) 1.9 0.0019 E12.5 retina GTGGTGTAGA 1.9 0.0019 E12.5 retina TTGGCAATGA (2) 1.9 0.0019 E14.5 retina CTGGTGGGCA (9) 1.8 0.0018 E14.5 retina GACCAGAAGG (6) 1.8 0.0018 E16.5 retina CTGGTGGGCA (9) 3.6 0.0036 E16.5 retina GACCAGAAGG (6) 1.8 0.0018 E16.5 retina GATTCCCGTG (2) 1.8 0.0018 E18.5 retina ATCCATATTG (3) 1.8 0.0018 P0.5 retina CTGGTGGGCA (9) 9.8 0.0098 P0.5 retina ATCCATATTG (3) 5.9 0.0059 P2.5 retina ATCCATATTG (3) 3.5 0.0035 P2.5 retina CTGGTGGGCA (9) 3.5 0.0035 P2.5 retina GATTCCCGTG (2) 1.8 0.0018 P4.5 retina TCCTGATCAA (3) 4 0.004 P4.5 retina ACTAGTGCTT (80) 2 0.002 P4.5 retina ATCCATATTG (3) 2 0.002 P4.5 retina CTGGTGGGCA (9) 2 0.002 P4.5 retina GATTCCCGTG (2) 2 0.002 P4.5 retina GCGTCTGGGA (3) 2 0.002 P6.5 retina CTGGTGGGCA (9) 5 0.005 P10.5 crx- retina ATCCATATTG (3) 1.9 0.0019 P10.5 crx- retina TTGGCAATGA (2) 1.9 0.0019 P10.5 crx+ retina GACCAGAAGG (6) 1.9 0.0019 P10.5 crx+ retina GATTCCCGTG (2) 1.9 0.0019 P10.5 crx+ retina GTGGTGTAGA 1.9 0.0019 P10.5 crx+ retina TTGGCAATGA (2) 1.9 0.0019 Adult retinal CTGGTGGGCA (9) 14.8 0.0148 ONL ATCCATATTG (3) 1.9 0.0019 ONL GATTCCCGTG (2) 1.9 0.0019 ONL GTGGTGTAGA 1.9 0.0019