Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.206505
Timp2
tissue inhibitor of metalloproteinase 2
11
11 72.0 cM
21858
Mm.206505
4921501M06Rik
RIKEN cDNA 4921501M06 gene
11
78135
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 75 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCACAGGCCA (
4
)
3.3
0.0033
P8 Cb GC
TGCGTGCTGG
(
2
)
3.3
0.0033
P8 Cb GC
TTCTGGTTTG
(
5
)
3.3
0.0033
P8 Cb GC
CCTGGGGGAG (
8
)
1.6
0.0016
P8 Cb GC
CTGGGGGCAG
(
4
)
1.6
0.0016
P8 Cb GC
GGACAGCGAG (
3
)
1.6
0.0016
P8 Cb GC
GGGAGGGAAA (
8
)
1.6
0.0016
Cb medulloblastoma
TGCGTGCTGG
(
2
)
6.9
0.0069
Cb medulloblastoma
AATAAACATC (
5
)
2.3
0.0023
Cb medulloblastoma
CCTGGGGGAG (
8
)
2.3
0.0023
P8 GC+1d culture
TGCGTGCTGG
(
2
)
4.6
0.0046
P8 GC+1d culture
AATAAAACAT
(
2
)
1.1
0.0011
P8 GC+1d culture
ATAAATACAT
(
2
)
1.1
0.0011
P8 GC+1d culture
GGACAGCGAG (
3
)
1.1
0.0011
P8 GC+1d culture
GTACTGGGTC (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
AATAAAACAT
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
TGCGTGCTGG
(
2
)
3.5
0.0035
P8 GC+SHH+1d culture
AATAAACATC (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
ACTAGTGCTT (
80
)
1.2
0.0012
P8 GC+SHH+1d culture
GCACAGGCCA (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TTCTGGTTTG
(
5
)
1.2
0.0012
3T3 fibroblasts
TGCGTGCTGG
(
2
)
73.6
0.0736
3T3 fibroblasts
CACGCATATG
(
2
)
10.5
0.0105
3T3 fibroblasts
TTCTGGTTTG
(
5
)
7
0.007
3T3 fibroblasts
GCACAGGCCA (
4
)
3.5
0.0035
P1 cortex
TTCTGGTTTG
(
5
)
13.6
0.0136
P1 cortex
ATAAATACAT
(
2
)
4.5
0.0045
P1 cortex
TGCGTGCTGG
(
2
)
4.5
0.0045
Hypothalamus
TGCGTGCTGG
(
2
)
25.4
0.0254
Hypothalamus
AATAAAACAT
(
2
)
9.1
0.0091
Hypothalamus
TTCTGGTTTG
(
5
)
3.6
0.0036
Hypothalamus
GCACAGGCCA (
4
)
1.8
0.0018
E12.5 retina
GCTGAGAGAA (
4
)
3.8
0.0038
E12.5 retina
TGCGTGCTGG
(
2
)
3.8
0.0038
E12.5 retina
ACTAGTGCTT (
80
)
1.9
0.0019
E12.5 retina
CCTGGGGGAG (
8
)
1.9
0.0019
E14.5 retina
TGCGTGCTGG
(
2
)
3.6
0.0036
E14.5 retina
AATAAACATC (
5
)
1.8
0.0018
E16.5 retina
GGACAGCGAG (
3
)
3.6
0.0036
E16.5 retina
AATAAACATC (
5
)
1.8
0.0018
E18.5 retina
TGCGTGCTGG
(
2
)
5.5
0.0055
E18.5 retina
ATAAATACAT
(
2
)
1.8
0.0018
P0.5 retina
GCTGAGAGAA (
4
)
5.9
0.0059
P0.5 retina
CCTGGGGGAG (
8
)
2
0.002
P0.5 retina
GTACTGGGTC (
3
)
2
0.002
P0.5 retina
TTCTGGTTTG
(
5
)
2
0.002
P2.5 retina
TGCGTGCTGG
(
2
)
3.5
0.0035
P2.5 retina
AATAAACATC (
5
)
1.8
0.0018
P2.5 retina
ATAAATACAT
(
2
)
1.8
0.0018
P2.5 retina
GGGAGGGAAA (
8
)
1.8
0.0018
P4.5 retina
TGCGTGCTGG
(
2
)
7.9
0.0079
P4.5 retina
ACTAGTGCTT (
80
)
2
0.002
P4.5 retina
CCTGGGGGAG (
8
)
2
0.002
P4.5 retina
GCTGAGAGAA (
4
)
2
0.002
P4.5 retina
TTCTGGTTTG
(
5
)
2
0.002
P6.5 retina
TGCGTGCTGG
(
2
)
3.3
0.0033
P6.5 retina
AATAAAACAT
(
2
)
1.7
0.0017
P6.5 retina
AATAAACATC (
5
)
1.7
0.0017
P6.5 retina
ATAAATACAT
(
2
)
1.7
0.0017
P6.5 retina
CCTGGGGGAG (
8
)
1.7
0.0017
P6.5 retina
TTCTGGTTTG
(
5
)
1.7
0.0017
P10.5 crx- retina
TGCGTGCTGG
(
2
)
3.7
0.0037
P10.5 crx- retina
CCTGGGGGAG (
8
)
1.9
0.0019
P10.5 crx- retina
TTCTGGTTTG
(
5
)
1.9
0.0019
P10.5 crx+ retina
TGCGTGCTGG
(
2
)
5.8
0.0058
P10.5 crx+ retina
CCTGGGGGAG (
8
)
1.9
0.0019
P10.5 crx+ retina
GGGAGGGAAA (
8
)
1.9
0.0019
Adult retinal
TGCGTGCTGG
(
2
)
7.4
0.0074
Adult retinal
AATAAAACAT
(
2
)
1.9
0.0019
Adult retinal
ATAAATACAT
(
2
)
1.9
0.0019
Adult retinal
CCTGGGGGAG (
8
)
1.9
0.0019
Adult retinal
CTGGGGGCAG
(
4
)
1.9
0.0019
Adult retinal
GTACTGGGTC (
3
)
1.9
0.0019
ONL
AATAAACATC (
5
)
1.9
0.0019
ONL
ATAAATACAT
(
2
)
1.9
0.0019
