Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.206934	Mbtps1	membrane-bound transcription factor protease, site 1	8		56453
Gene Ontology	cholesterol metabolism | endoplasmic reticulum | extracellular space | Golgi apparatus | hydrolase activity | integral to membrane | lipid metabolism | peptidase activity | proteolysis and peptidolysis | serine-type endopeptidase activity | subtilase activity
Human Homolog	MBTPS1[membrane-bound transcription factor protease, site 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 105 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCCCACCTT (15) 3.3 0.0033 P8 Cb GC ATGGCAGTTG 1.6 0.0016 P8 Cb GC CACAAGGAGA (4) 1.6 0.0016 P8 Cb GC GCAAGTTGGA (2) 1.6 0.0016 P8 Cb GC GCCACCGAGG (2) 1.6 0.0016 P8 Cb GC GGGACTGAGG (3) 1.6 0.0016 Cb medulloblastoma CTCCCACCTT (15) 13.9 0.0139 Cb medulloblastoma TTTTGTAATT (2) 4.6 0.0046 Cb medulloblastoma AGCCACCACT 2.3 0.0023 Cb medulloblastoma ATGATGAGAG (2) 2.3 0.0023 Cb medulloblastoma GTGGCCTGGC 2.3 0.0023 Cb medulloblastoma GTGGGCCTGG (6) 2.3 0.0023 Cb medulloblastoma TCAGGGGTTT (2) 2.3 0.0023 P8 GC+1d culture CTCCCACCTT (15) 9.1 0.0091 P8 GC+1d culture ATGGCAGTTG 5.7 0.0057 P8 GC+1d culture TTTTGTAATT (2) 4.6 0.0046 P8 GC+1d culture GCCACCGAGG (2) 2.3 0.0023 P8 GC+1d culture ATGATGAGAG (2) 1.1 0.0011 P8 GC+1d culture TGCTGTGTGG (4) 1.1 0.0011 P8 GC+SHH+1d culture TTTTGTAATT (2) 9.4 0.0094 P8 GC+SHH+1d culture CTCCCACCTT (15) 8.2 0.0082 P8 GC+SHH+1d culture ATGATGAGAG (2) 1.2 0.0012 P8 GC+SHH+1d culture ATGGCAGTTG 1.2 0.0012 P8 GC+SHH+1d culture GACAAGAAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture GCAAGTTGGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GCCACCGAGG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGCCTGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TCAGGGGTTT (2) 1.2 0.0012 3T3 fibroblasts CTCCCACCTT (15) 10.5 0.0105 E15 cortex CTCCCACCTT (15) 9.9 0.0099 E15 cortex CACAAGGAGA (4) 4.9 0.0049 P1 cortex ATGGGGGTTG 4.5 0.0045 P1 cortex CACAAGGAGA (4) 4.5 0.0045 Hypothalamus CTCCCACCTT (15) 9.1 0.0091 Hypothalamus GTGGCCTGGC 3.6 0.0036 Hypothalamus GCAAGTTGGA (2) 1.8 0.0018 Hypothalamus GGGACTGAGG (3) 1.8 0.0018 Hypothalamus TCAGGGGTTT (2) 1.8 0.0018 E12.5 retina CTCCCACCTT (15) 9.4 0.0094 E12.5 retina ATGATGAGAG (2) 5.6 0.0056 E12.5 retina CTTGTTACAG (2) 1.9 0.0019 E12.5 retina GCAAGTTGGA (2) 1.9 0.0019 E12.5 retina TGCTGTGTGG (4) 1.9 0.0019 E14.5 retina CTCCCACCTT (15) 12.8 0.0128 E14.5 retina TTTTGTAATT (2) 5.5 0.0055 E14.5 retina ACTTAGATAA 1.8 0.0018 E14.5 retina ATGATGAGAG (2) 1.8 0.0018 E14.5 retina ATGGCAGTTG 1.8 0.0018 E16.5 retina CTCCCACCTT (15) 9.1 0.0091 E16.5 retina ATGATGAGAG (2) 5.4 0.0054 E16.5 retina CTTGTTACAG (2) 1.8 0.0018 E16.5 retina TTTTGTAATT (2) 1.8 0.0018 E18.5 retina CTCCCACCTT (15) 14.6 0.0146 E18.5 retina TTTTGTAATT (2) 5.5 0.0055 E18.5 retina ATGATGAGAG (2) 1.8 0.0018 E18.5 retina CACAAGGAGA (4) 1.8 0.0018 E18.5 retina GTGGGCCTGG (6) 1.8 0.0018 P0.5 retina CTCCCACCTT (15) 11.8 0.0118 P0.5 retina ATGGCAGTTG 2 0.002 P0.5 retina GCAAGTTGGA (2) 2 0.002 P0.5 retina GGGACTGAGG (3) 2 0.002 P0.5 retina GTGGCCTGGC 2 0.002 P0.5 retina GTGGGCCTGG (6) 2 0.002 P2.5 retina CTCCCACCTT (15) 15.8 0.0158 P2.5 retina TTTTGTAATT (2) 8.8 0.0088 P2.5 retina ATGATGAGAG (2) 5.3 0.0053 P2.5 retina ATGGCAGTTG 1.8 0.0018 P2.5 retina CTTGTTACAG (2) 1.8 0.0018 P2.5 retina TCAGGGGTTT (2) 1.8 0.0018 P2.5 retina TGCTGTGTGG (4) 1.8 0.0018 P4.5 retina CTCCCACCTT (15) 37.6 0.0376 P4.5 retina ATGATGAGAG (2) 4 0.004 P4.5 retina TTTTGTAATT (2) 4 0.004 P4.5 retina ATGGCAGTTG 2 0.002 P6.5 retina CTCCCACCTT (15) 20 0.02 P6.5 retina TTTTGTAATT (2) 8.3 0.0083 P6.5 retina ATGGCAGTTG 1.7 0.0017 P6.5 retina GACAAGAAAA (7) 1.7 0.0017 P10.5 crx- retina CTCCCACCTT (15) 13 0.013 P10.5 crx- retina TTTTGTAATT (2) 5.6 0.0056 P10.5 crx- retina ATGGCAGTTG 1.9 0.0019 P10.5 crx- retina GTGGCCTGGC 1.9 0.0019 P10.5 crx- retina GTGGGCCTGG (6) 1.9 0.0019 P10.5 crx+ retina CTCCCACCTT (15) 21.1 0.0211 P10.5 crx+ retina TTTTGTAATT (2) 5.8 0.0058 P10.5 crx+ retina AGCCACCACT 3.8 0.0038 P10.5 crx+ retina ATGATGAGAG (2) 3.8 0.0038 P10.5 crx+ retina ATGGGGGTTG 1.9 0.0019 P10.5 crx+ retina GTGGGCCTGG (6) 1.9 0.0019 P10.5 crx+ retina TCAGGGGTTT (2) 1.9 0.0019 Adult retinal CTCCCACCTT (15) 35.2 0.0352 Adult retinal GTGGCCTGGC 9.3 0.0093 Adult retinal ATGATGAGAG (2) 1.9 0.0019 Adult retinal ATGGCAGTTG 1.9 0.0019 Adult retinal CACAAGGAGA (4) 1.9 0.0019 Adult retinal GACAAGAAAA (7) 1.9 0.0019 Adult retinal TGCTGTGTGG (4) 1.9 0.0019 ONL CTCCCACCTT (15) 15.3 0.0153 ONL ACTTAGATAA 3.8 0.0038 ONL ATGGCAGTTG 3.8 0.0038 ONL TTTTGTAATT (2) 3.8 0.0038 ONL AGCCACCACT 1.9 0.0019 ONL ATGATGAGAG (2) 1.9 0.0019 ONL ATGGGGGTTG 1.9 0.0019 ONL GTGGGCCTGG (6) 1.9 0.0019