Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.207261
Fubp3
far upstream element (FUSE) binding protein 3
2
320267
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
TATTTTTAAA (
14
)
6.5
0.0065
P8 Cb GC
TTGTTTTTTA
(
2
)
3.3
0.0033
P8 Cb GC
GGAAAACATA
(
2
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
TGATGTGTAC (
6
)
2.3
0.0023
Cb medulloblastoma
TTAACTGTAG (
3
)
2.3
0.0023
Cb medulloblastoma
TTGTTTTTTA
(
2
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
TTGTTTTTTA
(
2
)
3.4
0.0034
P8 GC+1d culture
TGATGTGTAC (
6
)
1.1
0.0011
P8 GC+1d culture
TTAACTGTAG (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
TTGTTTTTTA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GGAAAACATA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTATCTGTAC
1.2
0.0012
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
TTGTTTTTTA
(
2
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
E15 cortex
TTGTTTTTTA
(
2
)
4.9
0.0049
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
P1 cortex
TATTTTTAAA (
14
)
4.5
0.0045
P1 cortex
TTATCTGTAC
4.5
0.0045
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E12.5 retina
GGAAATCAAA
(
2
)
3.8
0.0038
E12.5 retina
TATTTTTAAA (
14
)
3.8
0.0038
E12.5 retina
GGAAAACATA
(
2
)
1.9
0.0019
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
TATTTTTAAA (
14
)
7.3
0.0073
E14.5 retina
CATAACATTT
3.6
0.0036
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
TATTTTTAAA (
14
)
3.6
0.0036
E16.5 retina
TTGTTTTTTA
(
2
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
TATTTTTAAA (
14
)
1.8
0.0018
E18.5 retina
TTGTTTTTTA
(
2
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
TATTTTTAAA (
14
)
2
0.002
P0.5 retina
TGATGTGTAC (
6
)
2
0.002
P0.5 retina
TTATCTGTAC
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
TATTTTTAAA (
14
)
5.3
0.0053
P2.5 retina
TTGTTTTTTA
(
2
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P4.5 retina
TTGTTTTTTA
(
2
)
4
0.004
P4.5 retina
TATTTTTAAA (
14
)
2
0.002
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
TATTTTTAAA (
14
)
6.7
0.0067
P6.5 retina
CATAACATTT
1.7
0.0017
P6.5 retina
TGATGTGTAC (
6
)
1.7
0.0017
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
TATTTTTAAA (
14
)
1.9
0.0019
P10.5 crx- retina
TGATGTGTAC (
6
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
TATTTTTAAA (
14
)
5.8
0.0058
P10.5 crx+ retina
TGATGTGTAC (
6
)
5.8
0.0058
P10.5 crx+ retina
TTGTTTTTTA
(
2
)
1.9
0.0019
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
TTGTTTTTTA
(
2
)
3.7
0.0037
Adult retinal
GGAAATCAAA
(
2
)
1.9
0.0019
Adult retinal
TTAACTGTAG (
3
)
1.9
0.0019
Adult retinal
TTATCTGTAC
1.9
0.0019
ONL
CCTTTAATCC (
355
)
84.3
0.0843
ONL
TATTTTTAAA (
14
)
1.9
0.0019
