Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.207263	Tcea1	transcription elongation factor A (SII) 1	1		21399
Gene Ontology	DNA binding | nucleoplasm | nucleus | positive regulation of transcription, DNA-dependent | protein binding | regulation of transcription, DNA-dependent | RNA elongation | transcription | transcription factor activity | translation elongation factor activity
Human Homolog	TCEA1[transcription elongation factor A (SII), 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATAATTTCT 9.8 0.0098 P8 Cb GC AAATACAAAA (5) 1.6 0.0016 P8 Cb GC ACCCTAGAAT 1.6 0.0016 P8 Cb GC GTGTCTGTTC (9) 1.6 0.0016 P8 Cb GC TTAAAAGGAA (8) 1.6 0.0016 Cb medulloblastoma GATAATTTCT 9.2 0.0092 Cb medulloblastoma AAATACAAAA (5) 2.3 0.0023 P8 GC+1d culture GATAATTTCT 2.3 0.0023 P8 GC+1d culture ACCCTAGAAT 1.1 0.0011 P8 GC+1d culture ATGATGTCAA (2) 1.1 0.0011 P8 GC+1d culture GTGTCTGTTC (9) 1.1 0.0011 P8 GC+1d culture TTAAAAGGAA (8) 1.1 0.0011 P8 GC+1d culture TTAAAAGGAT (3) 1.1 0.0011 P8 GC+SHH+1d culture GATAATTTCT 4.7 0.0047 P8 GC+SHH+1d culture ACCCTAGAAT 1.2 0.0012 P8 GC+SHH+1d culture GTGTCTGTTC (9) 1.2 0.0012 3T3 fibroblasts GTGTCTGTTC (9) 3.5 0.0035 E15 cortex ACCCTAGAAT 4.9 0.0049 E15 cortex ATGATGTCAA (2) 4.9 0.0049 E15 cortex GATAATTTCT 4.9 0.0049 P1 cortex GTGTCTGTTC (9) 9.1 0.0091 P1 cortex TTAAAAGGAA (8) 4.5 0.0045 Hypothalamus GTGTCTGTTC (9) 1.8 0.0018 E12.5 retina TTAAAGGATT (3) 7.5 0.0075 E12.5 retina AAATACAAAA (5) 1.9 0.0019 E12.5 retina GATAATTTCT 1.9 0.0019 E12.5 retina GTGTCTGTTC (9) 1.9 0.0019 E14.5 retina GTGTCTGTTC (9) 10.9 0.0109 E14.5 retina GATAATTTCT 3.6 0.0036 E14.5 retina TTAAAAGGAA (8) 1.8 0.0018 E16.5 retina GATAATTTCT 7.2 0.0072 E16.5 retina GTGTCTGTTC (9) 5.4 0.0054 E16.5 retina AAATACAAAA (5) 1.8 0.0018 E16.5 retina TTAAAAGGAA (8) 1.8 0.0018 E16.5 retina TTAAAAGGAT (3) 1.8 0.0018 E18.5 retina GATAATTTCT 10.9 0.0109 E18.5 retina GTGTCTGTTC (9) 5.5 0.0055 E18.5 retina ATGATGTCAA (2) 1.8 0.0018 P0.5 retina GATAATTTCT 7.9 0.0079 P0.5 retina ATGATGTCAA (2) 2 0.002 P2.5 retina GATAATTTCT 5.3 0.0053 P2.5 retina GTGTCTGTTC (9) 5.3 0.0053 P2.5 retina TTAAAAGGAT (3) 3.5 0.0035 P4.5 retina GTGTCTGTTC (9) 4 0.004 P4.5 retina AAATACAAAA (5) 2 0.002 P6.5 retina GATAATTTCT 5 0.005 P6.5 retina GTGTCTGTTC (9) 1.7 0.0017 P6.5 retina TTAAAGGATT (3) 1.7 0.0017 P10.5 crx- retina GATAATTTCT 3.7 0.0037 P10.5 crx+ retina GATAATTTCT 5.8 0.0058 P10.5 crx+ retina GTGTCTGTTC (9) 1.9 0.0019 P10.5 crx+ retina TTAAAAGGAA (8) 1.9 0.0019 Adult retinal GTGTCTGTTC (9) 3.7 0.0037 Adult retinal AAATACAAAA (5) 1.9 0.0019 ONL GTGTCTGTTC (9) 13.4 0.0134 ONL TTAAAGGATT (3) 13.4 0.0134 ONL GATAATTTCT 1.9 0.0019 ONL TTAAAAGGAA (8) 1.9 0.0019 ONL TTAAAAGGAT (3) 1.9 0.0019