Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2080	Gtl3	gene trap locus 3	8	8 C5	14894
Human Homolog	GTL3[likely ortholog of mouse gene trap locus 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 11 In Situ Hybridization Images

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SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACAGTTGTG (2) 1.6 0.0016 Cb medulloblastoma CCCTGCGGTT (2) 2.3 0.0023 Cb medulloblastoma GCAGATTCAG (3) 2.3 0.0023 Cb medulloblastoma TGGGTCCCAG (6) 2.3 0.0023 P8 GC+1d culture CACAGTTGTG (2) 1.1 0.0011 P8 GC+1d culture GCAGATTCAG (3) 1.1 0.0011 P8 GC+SHH+1d culture GCAGATTCAG (3) 2.3 0.0023 P8 GC+SHH+1d culture CACAGTTGTG (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGGTCCCAG (6) 1.2 0.0012 3T3 fibroblasts CCCTGCGGTT (2) 10.5 0.0105 3T3 fibroblasts CACAGTTGTG (2) 7 0.007 3T3 fibroblasts GCACCAATGA (4) 3.5 0.0035 E15 cortex CACAGTTGTG (2) 4.9 0.0049 E15 cortex GCAGATTCAG (3) 4.9 0.0049 E15 cortex TGGGTCCCAG (6) 4.9 0.0049 P1 cortex GCAGATTCAG (3) 9.1 0.0091 Hypothalamus GCAGATTCAG (3) 1.8 0.0018 E12.5 retina CACAGTTGTG (2) 1.9 0.0019 E12.5 retina GCAGATTCAG (3) 1.9 0.0019 E14.5 retina CCAGTGTGTT 1.8 0.0018 E16.5 retina CACAGTTGTG (2) 3.6 0.0036 E16.5 retina CCCTGCGGTT (2) 1.8 0.0018 E16.5 retina TGGGTCCCAG (6) 1.8 0.0018 P0.5 retina CACAGTTGTG (2) 19.6 0.0196 P0.5 retina CCCTGCGGTT (2) 2 0.002 P0.5 retina GCACCAATGA (4) 2 0.002 P0.5 retina GCAGATTCAG (3) 2 0.002 P2.5 retina GCAGATTCAG (3) 1.8 0.0018 P4.5 retina CCAGTGTGTT 2 0.002 P4.5 retina TGGGTCCCAG (6) 2 0.002 P6.5 retina CACAGTTGTG (2) 3.3 0.0033 P6.5 retina GCAGATTCAG (3) 1.7 0.0017 P6.5 retina TGGGTCCCAG (6) 1.7 0.0017 P10.5 crx- retina CACAGTTGTG (2) 7.4 0.0074 P10.5 crx- retina GCAGATTCAG (3) 3.7 0.0037 P10.5 crx- retina CCAGTGTGTT 1.9 0.0019 P10.5 crx+ retina CACAGTTGTG (2) 1.9 0.0019 P10.5 crx+ retina GCACCAATGA (4) 1.9 0.0019 P10.5 crx+ retina TGGGTCCCAG (6) 1.9 0.0019 Adult retinal CACAGTTGTG (2) 9.3 0.0093 Adult retinal GCAGATTCAG (3) 1.9 0.0019 Adult retinal TGGGTCCCAG (6) 1.9 0.0019 ONL TGGGTCCCAG (6) 3.8 0.0038