Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20827	Hipk1	homeodomain interacting protein kinase 1	3		15257
Gene Ontology	ATP binding | cytoplasm | kinase activity | nuclear speck | nucleus | PML body | protein amino acid phosphorylation | protein binding | protein kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	HIPK1[homeodomain interacting protein kinase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTTAAAAAA (15) 3.3 0.0033 P8 Cb GC AGTTCAAGTC (6) 1.6 0.0016 Cb medulloblastoma GAATAGGGGT (2) 11.6 0.0116 Cb medulloblastoma CTTTAAAAAA (15) 9.2 0.0092 Cb medulloblastoma GTTGTTTGTT (6) 9.2 0.0092 Cb medulloblastoma CTGCACCATC (2) 2.3 0.0023 P8 GC+1d culture CTTTAAAAAA (15) 2.3 0.0023 P8 GC+1d culture CTGCACCATC (2) 1.1 0.0011 P8 GC+1d culture GGGAGGAAGA (3) 1.1 0.0011 P8 GC+SHH+1d culture GGGAGGAAGA (3) 3.5 0.0035 P8 GC+SHH+1d culture CTGCACCATC (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTTAAAAAA (15) 1.2 0.0012 3T3 fibroblasts GTTGTTTGTT (6) 7 0.007 3T3 fibroblasts CTGCACCATC (2) 3.5 0.0035 P1 cortex CTTTAAAAAA (15) 4.5 0.0045 P1 cortex GTTGTTTGTT (6) 4.5 0.0045 Hypothalamus GAATAGGGGT (2) 7.2 0.0072 Hypothalamus CTTTAAAAAA (15) 5.4 0.0054 Hypothalamus TGACTTTATT (4) 1.8 0.0018 E12.5 retina CTGCACCATC (2) 1.9 0.0019 E12.5 retina CTTTAAAAAA (15) 1.9 0.0019 E14.5 retina AGTTCAAGTC (6) 1.8 0.0018 E14.5 retina TGACTTTATT (4) 1.8 0.0018 E16.5 retina CTTTAAAAAA (15) 3.6 0.0036 E16.5 retina GAATAGGGGT (2) 1.8 0.0018 E18.5 retina CTTTAAAAAA (15) 27.3 0.0273 P0.5 retina CTTTAAAAAA (15) 2 0.002 P0.5 retina GGGAGGAAGA (3) 2 0.002 P2.5 retina CTTTAAAAAA (15) 10.6 0.0106 P2.5 retina AGTTCAAGTC (6) 3.5 0.0035 P2.5 retina TGATATGATA 3.5 0.0035 P2.5 retina GTTGTTTGTT (6) 1.8 0.0018 P4.5 retina CTTTAAAAAA (15) 17.8 0.0178 P4.5 retina GAATAGGGGT (2) 4 0.004 P6.5 retina CTTTAAAAAA (15) 13.3 0.0133 P10.5 crx- retina CTTTAAAAAA (15) 1.9 0.0019 P10.5 crx- retina GTTGTTTGTT (6) 1.9 0.0019 P10.5 crx+ retina GAATAGGGGT (2) 19.2 0.0192 P10.5 crx+ retina CTTTAAAAAA (15) 5.8 0.0058 P10.5 crx+ retina CTGCACCATC (2) 1.9 0.0019 P10.5 crx+ retina GGGAGTAAGA (2) 1.9 0.0019 P10.5 crx+ retina TGATATGATA 1.9 0.0019 Adult retinal CTTTAAAAAA (15) 7.4 0.0074 Adult retinal GAATAGGGGT (2) 5.6 0.0056 Adult retinal AGTTCAAGTC (6) 3.7 0.0037 Adult retinal GGGAGTAAGA (2) 3.7 0.0037 Adult retinal GTTGTTTGTT (6) 3.7 0.0037 Adult retinal TGATATGATA 1.9 0.0019 ONL CTTTAAAAAA (15) 1.9 0.0019 ONL GAATAGGGGT (2) 1.9 0.0019