Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.209147
5830467E07Rik
RIKEN cDNA 5830467E07 gene
6
76107
Mm.209147
C730024G19Rik
RIKEN cDNA C730024G19 gene
6
232566
Human Homolog
LOC196394[hypothetical protein LOC196394]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCC (
355
)
52.2
0.0522
P8 Cb GC
GAAAAAAATA (
16
)
1.6
0.0016
P8 Cb GC
GCTGCCCCCT
(
9
)
1.6
0.0016
Cb medulloblastoma
CCTTTAATCC (
355
)
41.6
0.0416
Cb medulloblastoma
GCTGCCCCCT
(
9
)
2.3
0.0023
P8 GC+1d culture
CCTTTAATCC (
355
)
32
0.032
P8 GC+1d culture
GCTGCCCCCT
(
9
)
5.7
0.0057
P8 GC+SHH+1d culture
CCTTTAATCC (
355
)
25.8
0.0258
P8 GC+SHH+1d culture
GCTGCCCCCT
(
9
)
3.5
0.0035
3T3 fibroblasts
CCTTTAATCC (
355
)
70.1
0.0701
3T3 fibroblasts
GCTGCCCCCT
(
9
)
3.5
0.0035
E15 cortex
CCTTTAATCC (
355
)
54.4
0.0544
P1 cortex
CCTTTAATCC (
355
)
154.5
0.1545
Hypothalamus
CCTTTAATCC (
355
)
19.9
0.0199
Hypothalamus
GCTGCCCCCT
(
9
)
5.4
0.0054
E12.5 retina
CCTTTAATCC (
355
)
75.1
0.0751
E14.5 retina
CCTTTAATCC (
355
)
120.3
0.1203
E14.5 retina
GCTGCCCCCT
(
9
)
1.8
0.0018
E16.5 retina
CCTTTAATCC (
355
)
68.8
0.0688
E16.5 retina
GCTGCCCCCT
(
9
)
9.1
0.0091
E16.5 retina
GTAATGATGG (
5
)
3.6
0.0036
E16.5 retina
GAAAAAAATA (
16
)
1.8
0.0018
E18.5 retina
CCTTTAATCC (
355
)
23.6
0.0236
E18.5 retina
GAAAAAAATA (
16
)
1.8
0.0018
P0.5 retina
CCTTTAATCC (
355
)
72.6
0.0726
P0.5 retina
GCTGCCCCCT
(
9
)
2
0.002
P0.5 retina
GTAATGATGG (
5
)
2
0.002
P2.5 retina
CCTTTAATCC (
355
)
70.4
0.0704
P2.5 retina
GTAATGATGG (
5
)
1.8
0.0018
P4.5 retina
CCTTTAATCC (
355
)
43.6
0.0436
P6.5 retina
CCTTTAATCC (
355
)
70
0.07
P6.5 retina
GCTGCCCCCT
(
9
)
3.3
0.0033
P10.5 crx- retina
CCTTTAATCC (
355
)
63.2
0.0632
P10.5 crx- retina
GCTGCCCCCT
(
9
)
1.9
0.0019
P10.5 crx+ retina
CCTTTAATCC (
355
)
38.4
0.0384
P10.5 crx+ retina
GCTGCCCCCT
(
9
)
7.7
0.0077
P10.5 crx+ retina
GTAATGATGG (
5
)
3.8
0.0038
Adult retinal
CCTTTAATCC (
355
)
129.6
0.1296
Adult retinal
GCTGCCCCCT
(
9
)
3.7
0.0037
ONL
CCTTTAATCC (
355
)
84.3
0.0843
