Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.209294	Ap3d1	adaptor-related protein complex 3, delta 1 subunit	10	10 43.0 cM	11776
Gene Ontology	Golgi trans face | intracellular protein transport | vesicle-mediated transport
Human Homolog	AP3D1[adaptor-related protein complex 3, delta 1 subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAGAGAGA (2) 11.4 0.0114 P8 Cb GC GAAAGGGCGG (4) 1.6 0.0016 P8 Cb GC TGTTTTTTGT (6) 1.6 0.0016 Cb medulloblastoma TGAAGAGAGA (2) 9.2 0.0092 Cb medulloblastoma TGTTTTTTGT (6) 6.9 0.0069 Cb medulloblastoma GAAAGGGCGG (4) 2.3 0.0023 Cb medulloblastoma TCTGCCTGCT (6) 2.3 0.0023 P8 GC+1d culture TGAAGAGAGA (2) 11.4 0.0114 P8 GC+1d culture GAAAGGGCGG (4) 6.8 0.0068 P8 GC+1d culture TCTGCCTGCT (6) 2.3 0.0023 P8 GC+1d culture TGTTTTTTGT (6) 2.3 0.0023 P8 GC+1d culture ACCACGGCCA 1.1 0.0011 P8 GC+SHH+1d culture TGAAGAGAGA (2) 10.5 0.0105 P8 GC+SHH+1d culture TGTTTTTTGT (6) 5.9 0.0059 P8 GC+SHH+1d culture GAAAGGGCGG (4) 3.5 0.0035 P8 GC+SHH+1d culture CAGCCCAGCA (3) 1.2 0.0012 3T3 fibroblasts TGAAGAGAGA (2) 3.5 0.0035 E15 cortex TGAAGAGAGA (2) 9.9 0.0099 E15 cortex GAAAGGGCGG (4) 4.9 0.0049 Hypothalamus TGAAGAGAGA (2) 12.7 0.0127 Hypothalamus TGTTTTTTGT (6) 12.7 0.0127 Hypothalamus GAAAGGGCGG (4) 1.8 0.0018 E12.5 retina TGAAGAGAGA (2) 3.8 0.0038 E12.5 retina GCAGTGCCTT (7) 1.9 0.0019 E14.5 retina TGAAGAGAGA (2) 23.7 0.0237 E14.5 retina TGTTTTTTGT (6) 3.6 0.0036 E14.5 retina ACCACGGCCA 1.8 0.0018 E14.5 retina GAAAGGGCGG (4) 1.8 0.0018 E16.5 retina TGAAGAGAGA (2) 12.7 0.0127 E16.5 retina GAAAGGGCGG (4) 10.9 0.0109 E16.5 retina ACCACGGCCA 1.8 0.0018 E16.5 retina CAGCCCAGCA (3) 1.8 0.0018 E16.5 retina TGTTTTTTGT (6) 1.8 0.0018 E18.5 retina TGAAGAGAGA (2) 9.1 0.0091 P0.5 retina TGAAGAGAGA (2) 13.7 0.0137 P0.5 retina GAAAGGGCGG (4) 7.9 0.0079 P0.5 retina TGTTTTTTGT (6) 2 0.002 P2.5 retina TGAAGAGAGA (2) 10.6 0.0106 P2.5 retina TGTTTTTTGT (6) 5.3 0.0053 P2.5 retina TCTGCCTGCT (6) 3.5 0.0035 P4.5 retina TGAAGAGAGA (2) 13.9 0.0139 P4.5 retina GCAGTGCCTT (7) 2 0.002 P4.5 retina TGTTTTTTGT (6) 2 0.002 P6.5 retina TGAAGAGAGA (2) 16.7 0.0167 P6.5 retina GAAAGGGCGG (4) 1.7 0.0017 P6.5 retina TGTTTTTTGT (6) 1.7 0.0017 P10.5 crx- retina TGAAGAGAGA (2) 20.4 0.0204 P10.5 crx- retina TGTTTTTTGT (6) 3.7 0.0037 P10.5 crx+ retina TGAAGAGAGA (2) 7.7 0.0077 P10.5 crx+ retina GAAAGGGCGG (4) 1.9 0.0019 P10.5 crx+ retina GCAGTGCCTT (7) 1.9 0.0019 P10.5 crx+ retina TGTTTTTTGT (6) 1.9 0.0019 Adult retinal TGAAGAGAGA (2) 3.7 0.0037 Adult retinal TCTGCCTGCT (6) 1.9 0.0019 Adult retinal TGTTTTTTGT (6) 1.9 0.0019 ONL TGAAGAGAGA (2) 17.2 0.0172 ONL TCTGCCTGCT (6) 3.8 0.0038 ONL CAGCCCAGCA (3) 1.9 0.0019 ONL TGTTTTTTGT (6) 1.9 0.0019