Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20944	Sphk1	sphingosine kinase 1	11		20698
Gene Ontology	calmodulin binding | DNA binding | kinase activity | sphinganine kinase activity
Human Homolog	SPHK1[sphingosine kinase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCGCACG (61) 13.1 0.0131 P8 Cb GC AAGTGGGTGC (4) 1.6 0.0016 Cb medulloblastoma GTGGCGCACG (61) 6.9 0.0069 Cb medulloblastoma CAGAGTGCTG (7) 4.6 0.0046 P8 GC+1d culture GTGGCGCACG (61) 6.8 0.0068 P8 GC+1d culture AAGTGGGTGC (4) 2.3 0.0023 P8 GC+SHH+1d culture CAGAGTGCTG (7) 7 0.007 P8 GC+SHH+1d culture GTGGCGCACG (61) 2.3 0.0023 3T3 fibroblasts GTGGCGCACG (61) 63.1 0.0631 E15 cortex GTGGCGCACG (61) 113.8 0.1138 P1 cortex GTGGCGCACG (61) 18.2 0.0182 Hypothalamus GTGGCGCACG (61) 3.6 0.0036 Hypothalamus AAGTGGGTGC (4) 1.8 0.0018 E12.5 retina GTGGCGCACG (61) 11.3 0.0113 E12.5 retina CAGAGTGCTG (7) 5.6 0.0056 E14.5 retina GTGGCGCACG (61) 29.2 0.0292 E16.5 retina GTGGCGCACG (61) 25.4 0.0254 E18.5 retina GTGGCGCACG (61) 10.9 0.0109 P0.5 retina GTGGCGCACG (61) 25.5 0.0255 P0.5 retina CAGAGTGCTG (7) 3.9 0.0039 P0.5 retina AAGTGGGTGC (4) 2 0.002 P2.5 retina GTGGCGCACG (61) 17.6 0.0176 P2.5 retina CAGAGTGCTG (7) 3.5 0.0035 P4.5 retina GTGGCGCACG (61) 17.8 0.0178 P6.5 retina GTGGCGCACG (61) 38.3 0.0383 P6.5 retina AAGTGGGTGC (4) 3.3 0.0033 P6.5 retina CAGAGTGCTG (7) 1.7 0.0017 P10.5 crx- retina GTGGCGCACG (61) 13 0.013 P10.5 crx+ retina GTGGCGCACG (61) 32.7 0.0327 P10.5 crx+ retina CAGAGTGCTG (7) 5.8 0.0058 Adult retinal GTGGCGCACG (61) 22.2 0.0222 Adult retinal AAGTGGGTGC (4) 1.9 0.0019 ONL GTGGCGCACG (61) 23 0.023 ONL AAGTGGGTGC (4) 3.8 0.0038 ONL CAGAGTGCTG (7) 1.9 0.0019