Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.209490
BC023488
cDNA sequence BC023488
X
237221
Mm.209490
B130034M20Rik
RIKEN cDNA B130034M20 gene
X
319644
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
AAAATGTCAT (
8
)
1.6
0.0016
P8 Cb GC
GGAGGCAGAG (
9
)
1.6
0.0016
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
GGAGGCAGAG (
9
)
2.3
0.0023
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GGAGGCAGAG (
9
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
GCGCACGAGG
(
3
)
3.5
0.0035
3T3 fibroblasts
GGAGGCAGAG (
9
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
GGAGGCAGAG (
9
)
4.9
0.0049
E15 cortex
GTGGATACAG
(
6
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
GGAGGCAGAG (
9
)
7.2
0.0072
Hypothalamus
AAAATGTCAT (
8
)
1.8
0.0018
Hypothalamus
TTGTCTCATA
(
2
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GGAGGCAGAG (
9
)
3.8
0.0038
E12.5 retina
TTGTCTCATA
(
2
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
GGAGGCAGAG (
9
)
14.6
0.0146
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
TTGTCTCATA
(
2
)
3.6
0.0036
E16.5 retina
GGAGGCAGAG (
9
)
1.8
0.0018
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
GGAGGCAGAG (
9
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
AAAATGTCAT (
8
)
2
0.002
P0.5 retina
GGAGGCAGAG (
9
)
2
0.002
P0.5 retina
GTGGATACAG
(
6
)
2
0.002
P0.5 retina
TTGTCTCATA
(
2
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
GGAGGCAGAG (
9
)
7
0.007
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
GGAGGCAGAG (
9
)
5.9
0.0059
P4.5 retina
GTGGATACAG
(
6
)
2
0.002
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
GGAGGCAGAG (
9
)
5
0.005
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
GCGCACGAGG
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
GGAGGCAGAG (
9
)
9.6
0.0096
P10.5 crx+ retina
GTGGATACAG
(
6
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
GGAGGCAGAG (
9
)
5.6
0.0056
Adult retinal
GCGCACGAGG
(
3
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
GGAGGCAGAG (
9
)
5.7
0.0057
