Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.209650	D830024F11Rik	RIKEN cDNA D830024F11 gene	3		320911
Mm.209650	Smarca3	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3	3	3 12.0 cM	20585
Gene Ontology	ATP binding | ATP dependent helicase activity | ATPase activity | DNA binding | helicase activity | nucleic acid binding | regulation of transcription from Pol II promoter | RNA polymerase II transcription factor activity | transcriptional activator activity
Human Homolog	SMARCA3[SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 22 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAAAAAAA (18) 3.3 0.0033 Cb medulloblastoma GAGAAAAAAA (18) 11.6 0.0116 Cb medulloblastoma AGAACAATCA (2) 2.3 0.0023 P8 GC+1d culture GAGAAAAAAA (18) 4.6 0.0046 P8 GC+SHH+1d culture GAGAAAAAAA (18) 3.5 0.0035 P1 cortex TTTTAGAGCA (2) 9.1 0.0091 P1 cortex GAGAAAAAAA (18) 4.5 0.0045 Hypothalamus GAGAAAAAAA (18) 1.8 0.0018 E12.5 retina TTTTAGAGCA (2) 1.9 0.0019 E14.5 retina GAGAAAAAAA (18) 9.1 0.0091 E16.5 retina GAGAAAAAAA (18) 1.8 0.0018 E18.5 retina AGAACAATCA (2) 1.8 0.0018 E18.5 retina GAGAAAAAAA (18) 1.8 0.0018 P0.5 retina GAGAAAAAAA (18) 2 0.002 P2.5 retina GAGAAAAAAA (18) 3.5 0.0035 P4.5 retina GAGAAAAAAA (18) 5.9 0.0059 P6.5 retina GAGAAAAAAA (18) 3.3 0.0033 P10.5 crx- retina AGAACAATCA (2) 3.7 0.0037 P10.5 crx- retina GAGAAAAAAA (18) 1.9 0.0019 P10.5 crx+ retina GAGAAAAAAA (18) 7.7 0.0077 P10.5 crx+ retina AGAACAATCA (2) 3.8 0.0038 ONL GAGAAAAAAA (18) 1.9 0.0019