Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.209903	Atf2	activating transcription factor 2	2	2 C3	11909
Gene Ontology	DNA binding | nucleic acid binding | nucleus | protein binding | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex | zinc ion binding
Human Homolog	ATF2[activating transcription factor 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTAAACCAT 17.9 0.0179 P8 Cb GC GCTTACTTAA (6) 3.3 0.0033 P8 Cb GC TGCCTGCTCC (3) 3.3 0.0033 P8 Cb GC TGTCACCCTC 1.6 0.0016 Cb medulloblastoma ACTAAACCAT 18.5 0.0185 Cb medulloblastoma CAAACTGTAC 2.3 0.0023 Cb medulloblastoma GTCCTGGCCA (3) 2.3 0.0023 Cb medulloblastoma TCTTAATAAA (3) 2.3 0.0023 P8 GC+1d culture TGCCTGCTCC (3) 17.1 0.0171 P8 GC+1d culture ACTAAACCAT 12.6 0.0126 P8 GC+1d culture GCTCCTCCCT (4) 2.3 0.0023 P8 GC+1d culture GCTTACTTAA (6) 2.3 0.0023 P8 GC+1d culture TCTTAATAAA (3) 2.3 0.0023 P8 GC+1d culture TGACGGGGAA 1.1 0.0011 P8 GC+1d culture TGTCACCCTC 1.1 0.0011 P8 GC+SHH+1d culture TGCCTGCTCC (3) 15.2 0.0152 P8 GC+SHH+1d culture ACTAAACCAT 8.2 0.0082 P8 GC+SHH+1d culture GCTCCTCCCT (4) 3.5 0.0035 P8 GC+SHH+1d culture TCTTAATAAA (3) 3.5 0.0035 P8 GC+SHH+1d culture GCTTACTTAA (6) 2.3 0.0023 P8 GC+SHH+1d culture GCTTATTAAA 2.3 0.0023 P8 GC+SHH+1d culture CAGAAGAAGT (3) 1.2 0.0012 3T3 fibroblasts TGCCTGCTCC (3) 24.5 0.0245 3T3 fibroblasts GTCCTGGCCA (3) 7 0.007 E15 cortex GCTCCTCCCT (4) 14.8 0.0148 E15 cortex ACTAAACCAT 4.9 0.0049 E15 cortex GATCCCAGGC (3) 4.9 0.0049 E15 cortex TGCCTGCTCC (3) 4.9 0.0049 P1 cortex GCTCCTCCCT (4) 18.2 0.0182 P1 cortex ACTAAACCAT 4.5 0.0045 P1 cortex TGCCTGCTCC (3) 4.5 0.0045 Hypothalamus TGCCTGCTCC (3) 14.5 0.0145 Hypothalamus ACTAAACCAT 12.7 0.0127 Hypothalamus TCTTAATAAA (3) 7.2 0.0072 Hypothalamus GATCCCAGGC (3) 1.8 0.0018 Hypothalamus TGACGGGGAA 1.8 0.0018 E12.5 retina TGCCTGCTCC (3) 9.4 0.0094 E12.5 retina ACTAAACCAT 7.5 0.0075 E12.5 retina GTCCTGGCCA (3) 7.5 0.0075 E12.5 retina CAAACTGTAC 1.9 0.0019 E12.5 retina CAGAAGAAGT (3) 1.9 0.0019 E14.5 retina ACTAAACCAT 10.9 0.0109 E14.5 retina TGCCTGCTCC (3) 10.9 0.0109 E14.5 retina CAAACTGTAC 1.8 0.0018 E14.5 retina GCTTATTAAA 1.8 0.0018 E14.5 retina GTCCTGGCCA (3) 1.8 0.0018 E14.5 retina TGTCACCCTC 1.8 0.0018 E16.5 retina TGCCTGCTCC (3) 18.1 0.0181 E16.5 retina ACTAAACCAT 10.9 0.0109 E16.5 retina GATCCCAGGC (3) 3.6 0.0036 E16.5 retina GCTTACTTAA (6) 1.8 0.0018 E16.5 retina GTCCTGGCCA (3) 1.8 0.0018 E16.5 retina TCTTAATAAA (3) 1.8 0.0018 E18.5 retina TGCCTGCTCC (3) 16.4 0.0164 E18.5 retina ACTAAACCAT 5.5 0.0055 E18.5 retina GCTTACTTAA (6) 3.6 0.0036 E18.5 retina GATCCCAGGC (3) 1.8 0.0018 E18.5 retina GCTCCTCCCT (4) 1.8 0.0018 E18.5 retina GCTTATTAAA 1.8 0.0018 E18.5 retina TCTTAATAAA (3) 1.8 0.0018 P0.5 retina GCTCCTCCCT (4) 5.9 0.0059 P0.5 retina GTCCTGGCCA (3) 5.9 0.0059 P0.5 retina TGCCTGCTCC (3) 3.9 0.0039 P0.5 retina ACTAAACCAT 2 0.002 P0.5 retina GATCCCAGGC (3) 2 0.002 P0.5 retina GCTTACTTAA (6) 2 0.002 P0.5 retina TCTTAATAAA (3) 2 0.002 P2.5 retina TGCCTGCTCC (3) 10.6 0.0106 P2.5 retina ACTAAACCAT 8.8 0.0088 P2.5 retina GCTCCTCCCT (4) 1.8 0.0018 P4.5 retina ACTAAACCAT 25.8 0.0258 P4.5 retina TGCCTGCTCC (3) 17.8 0.0178 P4.5 retina GATCCCAGGC (3) 5.9 0.0059 P4.5 retina GTCCTGGCCA (3) 2 0.002 P6.5 retina TGCCTGCTCC (3) 21.7 0.0217 P6.5 retina ACTAAACCAT 15 0.015 P6.5 retina GATCCCAGGC (3) 1.7 0.0017 P6.5 retina GCTCCTCCCT (4) 1.7 0.0017 P6.5 retina GCTTACTTAA (6) 1.7 0.0017 P10.5 crx- retina TGCCTGCTCC (3) 9.3 0.0093 P10.5 crx- retina ACTAAACCAT 3.7 0.0037 P10.5 crx- retina TGACGGGGAA 3.7 0.0037 P10.5 crx- retina GATCCCAGGC (3) 1.9 0.0019 P10.5 crx- retina GCTTACTTAA (6) 1.9 0.0019 P10.5 crx- retina GTCCTGGCCA (3) 1.9 0.0019 P10.5 crx- retina TCTTAATAAA (3) 1.9 0.0019 P10.5 crx+ retina TGCCTGCTCC (3) 23.1 0.0231 P10.5 crx+ retina ACTAAACCAT 9.6 0.0096 P10.5 crx+ retina CAGAAGAAGT (3) 1.9 0.0019 P10.5 crx+ retina GATCCCAGGC (3) 1.9 0.0019 P10.5 crx+ retina GCTCCTCCCT (4) 1.9 0.0019 P10.5 crx+ retina GCTTATTAAA 1.9 0.0019 Adult retinal TGCCTGCTCC (3) 7.4 0.0074 Adult retinal ACTAAACCAT 3.7 0.0037 Adult retinal GATCCCAGGC (3) 3.7 0.0037 ONL TGCCTGCTCC (3) 13.4 0.0134 ONL ACTAAACCAT 3.8 0.0038 ONL GATCCCAGGC (3) 3.8 0.0038