Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.210815	9530039L23Rik	RIKEN cDNA 9530039L23 gene	19		78422
Mm.210815	5730409N24Rik	RIKEN cDNA 5730409N24 gene	19		70485
Mm.210815	AA416451	expressed sequence AA416451	19		107089
Mm.210815	9130009M17Rik	RIKEN cDNA 9130009M17 gene	19		71588
Mm.210815	Sorbs1	sorbin and SH3 domain containing 1	19	19 36.5 cM	20411
Gene Ontology	membrane | nucleus | protein binding | protein binding | protein kinase binding | stress fibers | transport
Human Homolog	SORBS1[sorbin and SH3 domain containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGAGTTACT (5) 17.9 0.0179 P8 Cb GC ACCTTTTCTT (9) 8.2 0.0082 P8 Cb GC AGCCAAAAAA (9) 6.5 0.0065 P8 Cb GC GCCGGGTGGG (5) 3.3 0.0033 Cb medulloblastoma AGCCAAAAAA (9) 32.4 0.0324 Cb medulloblastoma TTGAGTTACT (5) 9.2 0.0092 Cb medulloblastoma ACCTTTTCTT (9) 6.9 0.0069 Cb medulloblastoma AGCAACATTA (6) 4.6 0.0046 Cb medulloblastoma CGCTTGGTGT (5) 2.3 0.0023 Cb medulloblastoma GCCGGGTGGG (5) 2.3 0.0023 P8 GC+1d culture TTGAGTTACT (5) 20.5 0.0205 P8 GC+1d culture ACCTTTTCTT (9) 14.8 0.0148 P8 GC+1d culture AGCCAAAAAA (9) 6.8 0.0068 P8 GC+SHH+1d culture AGCCAAAAAA (9) 18.7 0.0187 P8 GC+SHH+1d culture ACCTTTTCTT (9) 14.1 0.0141 P8 GC+SHH+1d culture TTGAGTTACT (5) 11.7 0.0117 E15 cortex AAGGGTCCCC (5) 4.9 0.0049 E15 cortex AGCCAAAAAA (9) 4.9 0.0049 P1 cortex ACCTTTTCTT (9) 13.6 0.0136 P1 cortex AGCAACATTA (6) 4.5 0.0045 P1 cortex GGTGTGTGGG (6) 4.5 0.0045 Hypothalamus ACCTTTTCTT (9) 5.4 0.0054 Hypothalamus GGTGTGTGGG (6) 5.4 0.0054 Hypothalamus TTGAGTTACT (5) 5.4 0.0054 Hypothalamus CGCTTGGTGT (5) 1.8 0.0018 E12.5 retina ACCTTTTCTT (9) 7.5 0.0075 E12.5 retina AGCCAAAAAA (9) 3.8 0.0038 E14.5 retina ACCTTTTCTT (9) 21.9 0.0219 E14.5 retina AGCCAAAAAA (9) 5.5 0.0055 E14.5 retina TTGAGTTACT (5) 3.6 0.0036 E16.5 retina ACCTTTTCTT (9) 14.5 0.0145 E16.5 retina AGCCAAAAAA (9) 3.6 0.0036 E16.5 retina TTGAGTTACT (5) 3.6 0.0036 E16.5 retina GGTGTGTGGG (6) 1.8 0.0018 E18.5 retina AGCCAAAAAA (9) 14.6 0.0146 E18.5 retina ACCTTTTCTT (9) 7.3 0.0073 P0.5 retina ACCTTTTCTT (9) 11.8 0.0118 P0.5 retina AGCCAAAAAA (9) 3.9 0.0039 P0.5 retina AGCAACATTA (6) 2 0.002 P2.5 retina ACCTTTTCTT (9) 8.8 0.0088 P2.5 retina TTGAGTTACT (5) 3.5 0.0035 P2.5 retina AGCCAAAAAA (9) 1.8 0.0018 P2.5 retina CGCTTGGTGT (5) 1.8 0.0018 P4.5 retina ACCTTTTCTT (9) 19.8 0.0198 P4.5 retina TTGAGTTACT (5) 5.9 0.0059 P4.5 retina ATTAAGCCAC (8) 4 0.004 P4.5 retina GGTGTGTGGG (6) 2 0.002 P6.5 retina AGCCAAAAAA (9) 10 0.01 P6.5 retina ACCTTTTCTT (9) 3.3 0.0033 P6.5 retina TTGAGTTACT (5) 3.3 0.0033 P6.5 retina AGCAACATTA (6) 1.7 0.0017 P10.5 crx- retina ACCTTTTCTT (9) 20.4 0.0204 P10.5 crx- retina TTGAGTTACT (5) 9.3 0.0093 P10.5 crx- retina AGCCAAAAAA (9) 3.7 0.0037 P10.5 crx- retina ATTAAGCCAC (8) 3.7 0.0037 P10.5 crx+ retina ACCTTTTCTT (9) 5.8 0.0058 P10.5 crx+ retina AGCCAAAAAA (9) 3.8 0.0038 P10.5 crx+ retina GGTGTGTGGG (6) 1.9 0.0019 Adult retinal AGCCAAAAAA (9) 5.6 0.0056 Adult retinal ACCTTTTCTT (9) 3.7 0.0037 Adult retinal TTGAGTTACT (5) 1.9 0.0019 ONL AAGGGTCCCC (5) 3.8 0.0038 ONL AGCCAAAAAA (9) 1.9 0.0019 ONL TTGAGTTACT (5) 1.9 0.0019