Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21094	Grinl1a	glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A	9	9 42.0 cM	28015
Gene Ontology	receptor activity
Human Homolog	GRINL1A[glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATGTACACA (4) 6.5 0.0065 P8 Cb GC ACTGAGGTTT 1.6 0.0016 Cb medulloblastoma ACTGAGGTTT 6.9 0.0069 Cb medulloblastoma TATGTACACA (4) 2.3 0.0023 Cb medulloblastoma TTCCTGAGAT 2.3 0.0023 P8 GC+1d culture TATGTACACA (4) 5.7 0.0057 P8 GC+1d culture TTTCCTGAGA (3) 3.4 0.0034 P8 GC+1d culture ACTGAGGTTT 1.1 0.0011 P8 GC+1d culture TCTGGATGCT (5) 1.1 0.0011 P8 GC+SHH+1d culture TATGTACACA (4) 4.7 0.0047 P8 GC+SHH+1d culture ACTGAGGTTT 3.5 0.0035 P8 GC+SHH+1d culture TCTGGATGCT (5) 1.2 0.0012 P8 GC+SHH+1d culture TTTCCTGAGA (3) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TATGTACACA (4) 3.5 0.0035 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex ACTGAGGTTT 4.5 0.0045 P1 cortex TATGTACACA (4) 4.5 0.0045 Hypothalamus TATGTACACA (4) 12.7 0.0127 Hypothalamus ACTGAGGTTT 7.2 0.0072 Hypothalamus TCTGGATGCT (5) 1.8 0.0018 Hypothalamus TTCCTGAGAT 1.8 0.0018 E12.5 retina TATGTACACA (4) 7.5 0.0075 E12.5 retina ACTGAGGTTT 1.9 0.0019 E12.5 retina GGGGATCAGT (9) 1.9 0.0019 E14.5 retina ACTGAGGTTT 9.1 0.0091 E14.5 retina TATGTACACA (4) 7.3 0.0073 E16.5 retina TATGTACACA (4) 14.5 0.0145 E16.5 retina GCGATGTGTT (3) 1.8 0.0018 E18.5 retina TATGTACACA (4) 10.9 0.0109 E18.5 retina ACTGAGGTTT 1.8 0.0018 E18.5 retina GCGATGTGTT (3) 1.8 0.0018 P0.5 retina TATGTACACA (4) 7.9 0.0079 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GCGATGTGTT (3) 2 0.002 P0.5 retina TTCCTGAGAT 2 0.002 P2.5 retina ACTGAGGTTT 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina ACTGAGGTTT 2 0.002 P4.5 retina GCGATGTGTT (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TATGTACACA (4) 2 0.002 P6.5 retina ACTGAGGTTT 8.3 0.0083 P6.5 retina TATGTACACA (4) 8.3 0.0083 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GCGATGTGTT (3) 1.7 0.0017 P10.5 crx- retina GGGGATCAGT (9) 1.9 0.0019 P10.5 crx- retina TATGTACACA (4) 1.9 0.0019 P10.5 crx- retina TCTGGATGCT (5) 1.9 0.0019 P10.5 crx+ retina ACTGAGGTTT 3.8 0.0038 P10.5 crx+ retina GGGGATCAGT (9) 1.9 0.0019 P10.5 crx+ retina TATGTACACA (4) 1.9 0.0019 Adult retinal GCGATGTGTT (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TATGTACACA (4) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TATGTACACA (4) 3.8 0.0038 ONL TCTGGATGCT (5) 3.8 0.0038 ONL TTCCTGAGAT 1.9 0.0019