Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.211096
D330022K07Rik
RIKEN cDNA D330022K07 gene
8
319940
Mm.211096
9430041O17Rik
RIKEN cDNA 9430041O17 gene
8
234214
Mm.211096
2010203O03Rik
RIKEN cDNA 2010203O03 gene
8
68029
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 58 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCAGTCCCT (
7
)
3.3
0.0033
P8 Cb GC
CAGCTTTGCT
(
4
)
1.6
0.0016
P8 Cb GC
TGGCTGGCTG (
8
)
1.6
0.0016
P8 Cb GC
TGGTTCTGGG (
7
)
1.6
0.0016
Cb medulloblastoma
TGGCTGGCTG (
8
)
2.3
0.0023
P8 GC+1d culture
CAGCTTTGCT
(
4
)
3.4
0.0034
P8 GC+1d culture
TGGCTGGCTG (
8
)
3.4
0.0034
P8 GC+1d culture
CCCAGTCCCT (
7
)
2.3
0.0023
P8 GC+1d culture
CAGCTTTGTT
(
3
)
1.1
0.0011
P8 GC+1d culture
CCAGAGACTT (
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTTTTTGTG (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CCCAGTCCCT (
7
)
1.2
0.0012
3T3 fibroblasts
TGGCTGGCTG (
8
)
3.5
0.0035
3T3 fibroblasts
TGGTTCTGGG (
7
)
3.5
0.0035
E15 cortex
CAGCTTTGCT
(
4
)
24.7
0.0247
E15 cortex
TGGCTGGCTG (
8
)
4.9
0.0049
P1 cortex
CAGCTTTGCT
(
4
)
4.5
0.0045
Hypothalamus
TGGTTCTGGG (
7
)
5.4
0.0054
Hypothalamus
GGCAATGCTT
(
5
)
3.6
0.0036
Hypothalamus
CCCAGTCCCT (
7
)
1.8
0.0018
Hypothalamus
TGGCTGGCTG (
8
)
1.8
0.0018
E12.5 retina
GGCAATGCTT
(
5
)
3.8
0.0038
E12.5 retina
CAGCTTTGCT
(
4
)
1.9
0.0019
E12.5 retina
CAGCTTTGTT
(
3
)
1.9
0.0019
E12.5 retina
TGGTTCTGGG (
7
)
1.9
0.0019
E14.5 retina
TGGCTGGCTG (
8
)
3.6
0.0036
E14.5 retina
TGGTTCTGGG (
7
)
1.8
0.0018
E16.5 retina
CAGCTTTGCT
(
4
)
5.4
0.0054
E16.5 retina
TGGTTCTGGG (
7
)
1.8
0.0018
E18.5 retina
CAGCTTTGCT
(
4
)
1.8
0.0018
E18.5 retina
GGCAATGCTT
(
5
)
1.8
0.0018
P0.5 retina
TGGCTGGCTG (
8
)
7.9
0.0079
P0.5 retina
GGCAATGCTT
(
5
)
2
0.002
P0.5 retina
TTTTTTTGTG (
6
)
2
0.002
P2.5 retina
GGCAATGCTT
(
5
)
7
0.007
P2.5 retina
CCCAGTCCCT (
7
)
3.5
0.0035
P2.5 retina
CAGCTTTGCT
(
4
)
1.8
0.0018
P2.5 retina
TGGCTGGCTG (
8
)
1.8
0.0018
P4.5 retina
CAGCTTTGCT
(
4
)
4
0.004
P4.5 retina
CCCAGTCCCT (
7
)
2
0.002
P4.5 retina
GGCAATGCTT
(
5
)
2
0.002
P6.5 retina
CAGCTTTGCT
(
4
)
3.3
0.0033
P6.5 retina
TGGCTGGCTG (
8
)
3.3
0.0033
P6.5 retina
CCCAGTCCCT (
7
)
1.7
0.0017
P6.5 retina
GGCAATGCTT
(
5
)
1.7
0.0017
P10.5 crx- retina
CAGCTTTGCT
(
4
)
5.6
0.0056
P10.5 crx- retina
CCAGAGACTT (
3
)
1.9
0.0019
P10.5 crx- retina
GGCAATGCTT
(
5
)
1.9
0.0019
P10.5 crx+ retina
GGCAATGCTT
(
5
)
5.8
0.0058
P10.5 crx+ retina
TGGCTGGCTG (
8
)
5.8
0.0058
P10.5 crx+ retina
CCCAGTCCCT (
7
)
1.9
0.0019
P10.5 crx+ retina
TTTTTTTGTG (
6
)
1.9
0.0019
Adult retinal
GGCAATGCTT
(
5
)
3.7
0.0037
Adult retinal
TGGTTCTGGG (
7
)
3.7
0.0037
Adult retinal
CAGCTTTGCT
(
4
)
1.9
0.0019
ONL
GGCAATGCTT
(
5
)
1.9
0.0019
ONL
TGGTTCTGGG (
7
)
1.9
0.0019
ONL
TTTTTTTGTG (
6
)
1.9
0.0019
