Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.211139	1810017N16Rik	RIKEN cDNA 1810017N16 gene	9		109095
Gene Ontology	nucleic acid binding
Human Homolog	HUMAGCGB[chromosome 3p21.1 gene sequence]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 95 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCAAATGA (7) 4.9 0.0049 P8 Cb GC TCTCTGGGTA (4) 4.9 0.0049 P8 Cb GC CCGCCCATTC (4) 3.3 0.0033 P8 Cb GC CTCTATGCCT (2) 1.6 0.0016 P8 Cb GC GCCTGAGCAC (2) 1.6 0.0016 P8 Cb GC GGCCCAAGGC (8) 1.6 0.0016 Cb medulloblastoma GGCCCAAGGC (8) 9.2 0.0092 Cb medulloblastoma CTCTATGCCT (2) 4.6 0.0046 Cb medulloblastoma GTGATAGTTA (3) 2.3 0.0023 P8 GC+1d culture AGCAGAGAAA (9) 4.6 0.0046 P8 GC+1d culture GGCCCAAGGC (8) 3.4 0.0034 P8 GC+1d culture AAGCAAATGA (7) 2.3 0.0023 P8 GC+1d culture GCGACTGGCC (2) 2.3 0.0023 P8 GC+1d culture CCGCCCATTC (4) 1.1 0.0011 P8 GC+1d culture GGGGTAGAGA 1.1 0.0011 P8 GC+SHH+1d culture GGCCCAAGGC (8) 7 0.007 P8 GC+SHH+1d culture GGGGTAAGAA (2) 3.5 0.0035 P8 GC+SHH+1d culture GATGCACTGA (4) 2.3 0.0023 P8 GC+SHH+1d culture AGCAGAGAAA (9) 1.2 0.0012 P8 GC+SHH+1d culture GCCTGAGCAC (2) 1.2 0.0012 P8 GC+SHH+1d culture GCGACTGGCC (2) 1.2 0.0012 3T3 fibroblasts GGCCCAAGGC (8) 17.5 0.0175 3T3 fibroblasts GGGGTAGAGA 3.5 0.0035 E15 cortex GTGATAGTTA (3) 4.9 0.0049 P1 cortex GGCCCAAGGC (8) 9.1 0.0091 P1 cortex GCCTGAGCAC (2) 4.5 0.0045 P1 cortex GCGACTGGCC (2) 4.5 0.0045 P1 cortex GTGATAGTTA (3) 4.5 0.0045 P1 cortex TCTCTGGGTA (4) 4.5 0.0045 Hypothalamus GGCCCAAGGC (8) 12.7 0.0127 Hypothalamus GCGACTGGCC (2) 3.6 0.0036 Hypothalamus AAGCAAATGA (7) 1.8 0.0018 Hypothalamus CCGCCCATTC (4) 1.8 0.0018 Hypothalamus TGGTACAACA (6) 1.8 0.0018 E12.5 retina CGGTGAGGCC (2) 1.9 0.0019 E12.5 retina GCCTGAGCAC (2) 1.9 0.0019 E12.5 retina GGCCCAAGGC (8) 1.9 0.0019 E12.5 retina TCTCTGGGTA (4) 1.9 0.0019 E14.5 retina TCTCTGGGTA (4) 3.6 0.0036 E14.5 retina AGCAGAGAAA (9) 1.8 0.0018 E14.5 retina GCGACTGGCC (2) 1.8 0.0018 E14.5 retina GGGGTAGAGA 1.8 0.0018 E14.5 retina GTGATAGTTA (3) 1.8 0.0018 E16.5 retina CGGTGAGGCC (2) 3.6 0.0036 E16.5 retina GGCCCAAGGC (8) 3.6 0.0036 E16.5 retina TGTTCTTCCT (7) 3.6 0.0036 E16.5 retina AAGCAAATGA (7) 1.8 0.0018 E16.5 retina GCCTGAGCAC (2) 1.8 0.0018 E16.5 retina GCGACTGGCC (2) 1.8 0.0018 E16.5 retina GGCTCCCAGA (3) 1.8 0.0018 E16.5 retina GGGGTAAGAA (2) 1.8 0.0018 E18.5 retina CGGTGAGGCC (2) 7.3 0.0073 E18.5 retina GCGACTGGCC (2) 3.6 0.0036 E18.5 retina AGCAGAGAAA (9) 1.8 0.0018 E18.5 retina GCCTGAGCAC (2) 1.8 0.0018 E18.5 retina GGCCCAAGGC (8) 1.8 0.0018 E18.5 retina GGGGTAGAGA 1.8 0.0018 P0.5 retina CGGTGAGGCC (2) 9.8 0.0098 P0.5 retina AAGCAAATGA (7) 3.9 0.0039 P0.5 retina GGGGTAAGAA (2) 3.9 0.0039 P0.5 retina GCGACTGGCC (2) 2 0.002 P0.5 retina GGCCCAAGGC (8) 2 0.002 P2.5 retina AGCAGAGAAA (9) 3.5 0.0035 P2.5 retina CGGTGAGGCC (2) 3.5 0.0035 P2.5 retina GGCCCAAGGC (8) 1.8 0.0018 P2.5 retina GGGGTAGAGA 1.8 0.0018 P4.5 retina GCGACTGGCC (2) 4 0.004 P4.5 retina GGCCCAAGGC (8) 4 0.004 P4.5 retina AGCAGAGAAA (9) 2 0.002 P4.5 retina GCCTGAGCAC (2) 2 0.002 P4.5 retina GGGGTAGAGA 2 0.002 P6.5 retina GGCCCAAGGC (8) 8.3 0.0083 P6.5 retina CGGTGAGGCC (2) 1.7 0.0017 P6.5 retina GCGACTGGCC (2) 1.7 0.0017 P6.5 retina GGCTCCCAGA (3) 1.7 0.0017 P10.5 crx- retina GGCCCAAGGC (8) 16.7 0.0167 P10.5 crx- retina GCGACTGGCC (2) 1.9 0.0019 P10.5 crx- retina GGGGTAAGAA (2) 1.9 0.0019 P10.5 crx- retina TGTTCTTCCT (7) 1.9 0.0019 P10.5 crx+ retina GGCCCAAGGC (8) 9.6 0.0096 P10.5 crx+ retina GCGACTGGCC (2) 3.8 0.0038 P10.5 crx+ retina GCCTGAGCAC (2) 1.9 0.0019 P10.5 crx+ retina GGCTCCCAGA (3) 1.9 0.0019 Adult retinal GGCCCAAGGC (8) 9.3 0.0093 Adult retinal AAGCAAATGA (7) 5.6 0.0056 Adult retinal TGGTACAACA (6) 3.7 0.0037 Adult retinal GATGCACTGA (4) 1.9 0.0019 Adult retinal GCCTGAGCAC (2) 1.9 0.0019 Adult retinal GGGGTAGAGA 1.9 0.0019 Adult retinal GTGATAGTTA (3) 1.9 0.0019 ONL GGCCCAAGGC (8) 3.8 0.0038 ONL AAGCAAATGA (7) 1.9 0.0019 ONL GCGACTGGCC (2) 1.9 0.0019 ONL GGCTCCCAGA (3) 1.9 0.0019 ONL GTGATAGTTA (3) 1.9 0.0019