Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21138	Nufip1	nuclear fragile X mental retardation protein interacting protein	14		27275
Gene Ontology	nucleus | RNA binding
Human Homolog	NUFIP1[nuclear fragile X mental retardation protein interacting protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCCGCCGC (3) 6.5 0.0065 P8 Cb GC CTCCCACCTT (15) 3.3 0.0033 P8 Cb GC TTGGATTTTA (3) 3.3 0.0033 P8 Cb GC AAAGAAATGT (4) 1.6 0.0016 P8 Cb GC ACCAAGGCAA (29) 1.6 0.0016 Cb medulloblastoma CTCCCACCTT (15) 13.9 0.0139 Cb medulloblastoma CTGCCGCCGC (3) 11.6 0.0116 Cb medulloblastoma ACCAAGGCAA (29) 2.3 0.0023 P8 GC+1d culture CTGCCGCCGC (3) 16 0.016 P8 GC+1d culture CTCCCACCTT (15) 9.1 0.0091 P8 GC+1d culture ACCAAGGCAA (29) 3.4 0.0034 P8 GC+1d culture AAAGAAATGT (4) 2.3 0.0023 P8 GC+1d culture AGGCTACCAG (2) 2.3 0.0023 P8 GC+1d culture TTGGATTTTA (3) 1.1 0.0011 P8 GC+SHH+1d culture CTCCCACCTT (15) 8.2 0.0082 P8 GC+SHH+1d culture CTGCCGCCGC (3) 8.2 0.0082 P8 GC+SHH+1d culture AAAGAAATGT (4) 4.7 0.0047 P8 GC+SHH+1d culture TTGGATTTTA (3) 2.3 0.0023 P8 GC+SHH+1d culture AGGCTACCAG (2) 1.2 0.0012 3T3 fibroblasts CTGCCGCCGC (3) 31.5 0.0315 3T3 fibroblasts CTCCCACCTT (15) 10.5 0.0105 3T3 fibroblasts AGGCTACCAG (2) 3.5 0.0035 E15 cortex CTGCCGCCGC (3) 39.6 0.0396 E15 cortex CTCCCACCTT (15) 9.9 0.0099 E15 cortex ACCAAGGCAA (29) 4.9 0.0049 P1 cortex CTGCCGCCGC (3) 27.3 0.0273 P1 cortex TTGGATTTTA (3) 4.5 0.0045 Hypothalamus CTCCCACCTT (15) 9.1 0.0091 Hypothalamus CTGCCGCCGC (3) 7.2 0.0072 Hypothalamus AAAGAAATGT (4) 3.6 0.0036 E12.5 retina CTCCCACCTT (15) 9.4 0.0094 E12.5 retina CTGCCGCCGC (3) 5.6 0.0056 E12.5 retina AAAGAAATGT (4) 3.8 0.0038 E12.5 retina TTGGATTTTA (3) 3.8 0.0038 E14.5 retina ACCAAGGCAA (29) 14.6 0.0146 E14.5 retina CTCCCACCTT (15) 12.8 0.0128 E14.5 retina TTGGATTTTA (3) 9.1 0.0091 E14.5 retina CTGCCGCCGC (3) 3.6 0.0036 E16.5 retina CTCCCACCTT (15) 9.1 0.0091 E16.5 retina TTGGATTTTA (3) 3.6 0.0036 E16.5 retina AAAGAAATGT (4) 1.8 0.0018 E18.5 retina CTCCCACCTT (15) 14.6 0.0146 E18.5 retina TTGGATTTTA (3) 9.1 0.0091 E18.5 retina AAAGAAATGT (4) 3.6 0.0036 E18.5 retina ACCAAGGCAA (29) 1.8 0.0018 E18.5 retina CTGCCGCCGC (3) 1.8 0.0018 P0.5 retina CTGCCGCCGC (3) 15.7 0.0157 P0.5 retina CTCCCACCTT (15) 11.8 0.0118 P0.5 retina ACCAAGGCAA (29) 3.9 0.0039 P0.5 retina TTGGATTTTA (3) 3.9 0.0039 P0.5 retina AGGCTACCAG (2) 2 0.002 P2.5 retina CTCCCACCTT (15) 15.8 0.0158 P2.5 retina AAAGAAATGT (4) 8.8 0.0088 P2.5 retina CTGCCGCCGC (3) 5.3 0.0053 P2.5 retina ACCAAGGCAA (29) 1.8 0.0018 P2.5 retina TTGGATTTTA (3) 1.8 0.0018 P4.5 retina CTCCCACCTT (15) 37.6 0.0376 P4.5 retina AAAGAAATGT (4) 7.9 0.0079 P4.5 retina TTGGATTTTA (3) 4 0.004 P4.5 retina CTGCCGCCGC (3) 2 0.002 P6.5 retina CTCCCACCTT (15) 20 0.02 P6.5 retina AAAGAAATGT (4) 5 0.005 P6.5 retina CTGCCGCCGC (3) 5 0.005 P6.5 retina ACCAAGGCAA (29) 1.7 0.0017 P6.5 retina AGGCTACCAG (2) 1.7 0.0017 P6.5 retina TTGGATTTTA (3) 1.7 0.0017 P10.5 crx- retina CTCCCACCTT (15) 13 0.013 P10.5 crx- retina AAAGAAATGT (4) 11.1 0.0111 P10.5 crx- retina CTGCCGCCGC (3) 5.6 0.0056 P10.5 crx- retina AGGCTACCAG (2) 1.9 0.0019 P10.5 crx+ retina CTCCCACCTT (15) 21.1 0.0211 P10.5 crx+ retina CTGCCGCCGC (3) 13.5 0.0135 P10.5 crx+ retina AAAGAAATGT (4) 7.7 0.0077 P10.5 crx+ retina AGGCTACCAG (2) 3.8 0.0038 P10.5 crx+ retina ACCAAGGCAA (29) 1.9 0.0019 P10.5 crx+ retina TTGGATTTTA (3) 1.9 0.0019 Adult retinal CTCCCACCTT (15) 35.2 0.0352 Adult retinal CTGCCGCCGC (3) 11.1 0.0111 Adult retinal AAAGAAATGT (4) 9.3 0.0093 Adult retinal ACCAAGGCAA (29) 1.9 0.0019 ONL CTCCCACCTT (15) 15.3 0.0153 ONL ACCAAGGCAA (29) 9.6 0.0096 ONL CTGCCGCCGC (3) 9.6 0.0096 ONL AAAGAAATGT (4) 5.7 0.0057 ONL TTGGATTTTA (3) 3.8 0.0038 ONL AGGCTACCAG (2) 1.9 0.0019