Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21162	Grim19	genes associated with retinoid-IFN-induced mortality 19	8		67184
Gene Ontology	apoptosis | ATP binding | integral to membrane | mitochondrion | nucleus | oxidoreductase activity
Human Homolog	GRIM19[cell death-regulatory protein GRIM19]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAAAAAAAA (35) 22.8 0.0228 P8 Cb GC AAGGATGTGC (4) 16.3 0.0163 P8 Cb GC AATTAAGGGG (3) 3.3 0.0033 P8 Cb GC GTCGGCCGCC (25) 3.3 0.0033 P8 Cb GC CCCCCGCCAG 1.6 0.0016 P8 Cb GC CGTCATCATC 1.6 0.0016 Cb medulloblastoma CCAAAAAAAA (35) 90.2 0.0902 Cb medulloblastoma AAGGATGTGC (4) 37 0.037 Cb medulloblastoma GGTGCCCCCC 2.3 0.0023 P8 GC+1d culture CCAAAAAAAA (35) 38.8 0.0388 P8 GC+1d culture AAGGATGTGC (4) 17.1 0.0171 P8 GC+1d culture AATTAAGGGG (3) 1.1 0.0011 P8 GC+1d culture GTCGGCCGCC (25) 1.1 0.0011 P8 GC+SHH+1d culture CCAAAAAAAA (35) 39.8 0.0398 P8 GC+SHH+1d culture AAGGATGTGC (4) 15.2 0.0152 P8 GC+SHH+1d culture AATTAAGGGG (3) 4.7 0.0047 P8 GC+SHH+1d culture GTCGGCCGCC (25) 4.7 0.0047 3T3 fibroblasts AAGGATGTGC (4) 24.5 0.0245 3T3 fibroblasts CCGCTCTTCC 3.5 0.0035 3T3 fibroblasts GTCGGCCGCC (25) 3.5 0.0035 E15 cortex AAGGATGTGC (4) 9.9 0.0099 E15 cortex CCAAAAAAAA (35) 9.9 0.0099 P1 cortex CCAAAAAAAA (35) 40.9 0.0409 P1 cortex AAGGATGTGC (4) 4.5 0.0045 P1 cortex CCGCTCTTCC 4.5 0.0045 Hypothalamus CCAAAAAAAA (35) 38 0.038 Hypothalamus AAGGATGTGC (4) 14.5 0.0145 Hypothalamus GTCGGCCGCC (25) 1.8 0.0018 Hypothalamus TTTGCTGTGG (2) 1.8 0.0018 E12.5 retina CCAAAAAAAA (35) 16.9 0.0169 E12.5 retina AAGGATGTGC (4) 9.4 0.0094 E12.5 retina CTTATTCTTT (2) 1.9 0.0019 E12.5 retina GTCGGCCGCC (25) 1.9 0.0019 E14.5 retina CCAAAAAAAA (35) 18.2 0.0182 E14.5 retina AAGGATGTGC (4) 12.8 0.0128 E14.5 retina AGGGCGATCC (2) 3.6 0.0036 E14.5 retina GTCGGCCGCC (25) 3.6 0.0036 E14.5 retina AATTAAGGGG (3) 1.8 0.0018 E16.5 retina CCAAAAAAAA (35) 16.3 0.0163 E16.5 retina AAGGATGTGC (4) 14.5 0.0145 E16.5 retina AATTAAGGGG (3) 1.8 0.0018 E18.5 retina CCAAAAAAAA (35) 38.2 0.0382 E18.5 retina AAGGATGTGC (4) 7.3 0.0073 E18.5 retina GGTGCCCCCC 1.8 0.0018 P0.5 retina CCAAAAAAAA (35) 29.4 0.0294 P0.5 retina AAGGATGTGC (4) 9.8 0.0098 P0.5 retina GTCGGCCGCC (25) 5.9 0.0059 P0.5 retina CGTCATCATC 3.9 0.0039 P0.5 retina AGGGCGATCC (2) 2 0.002 P0.5 retina CTTATTCTTT (2) 2 0.002 P2.5 retina CCAAAAAAAA (35) 44 0.044 P2.5 retina AAGGATGTGC (4) 3.5 0.0035 P2.5 retina AATTAAGGGG (3) 3.5 0.0035 P2.5 retina GTCGGCCGCC (25) 3.5 0.0035 P2.5 retina AAGGATGTGT (5) 1.8 0.0018 P2.5 retina CCCCCGCCAG 1.8 0.0018 P2.5 retina CTTATTCTTT (2) 1.8 0.0018 P4.5 retina CCAAAAAAAA (35) 39.6 0.0396 P4.5 retina AAGGATGTGC (4) 4 0.004 P4.5 retina AGGGCGATCC (2) 2 0.002 P4.5 retina CGTCATCATC 2 0.002 P4.5 retina CTTATTCTTT (2) 2 0.002 P4.5 retina GTCGGCCGCC (25) 2 0.002 P6.5 retina CCAAAAAAAA (35) 38.3 0.0383 P6.5 retina AAGGATGTGC (4) 11.7 0.0117 P6.5 retina AATTAAGGGG (3) 1.7 0.0017 P6.5 retina GGTGCCCCCC 1.7 0.0017 P10.5 crx- retina AAGGATGTGC (4) 61.3 0.0613 P10.5 crx- retina CCAAAAAAAA (35) 14.9 0.0149 P10.5 crx- retina TTTGCTGTGG (2) 5.6 0.0056 P10.5 crx- retina GTCGGCCGCC (25) 3.7 0.0037 P10.5 crx- retina AAGGATGTGT (5) 1.9 0.0019 P10.5 crx- retina AATTAAGGGG (3) 1.9 0.0019 P10.5 crx+ retina CCAAAAAAAA (35) 38.4 0.0384 P10.5 crx+ retina AAGGATGTGC (4) 13.5 0.0135 P10.5 crx+ retina GTCGGCCGCC (25) 3.8 0.0038 Adult retinal CCAAAAAAAA (35) 35.2 0.0352 Adult retinal AAGGATGTGC (4) 20.4 0.0204 Adult retinal AAGGATGTGT (5) 1.9 0.0019 Adult retinal AGGGCGATCC (2) 1.9 0.0019 Adult retinal CCGCTCTTCC 1.9 0.0019 Adult retinal GTCGGCCGCC (25) 1.9 0.0019 ONL AAGGATGTGC (4) 7.7 0.0077 ONL CCAAAAAAAA (35) 7.7 0.0077