Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.211654	Ifrg15	interferon alpha responsive gene	1	1 G3	64164
Mm.211654	9430034N14Rik	RIKEN cDNA 9430034N14 gene	1		320811
Mm.211654	MGC6357	hypothetical protein MGC6357	1		208263
Human Homolog	LAP1B[lamina-associated polypeptide 1B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 9 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CACACACACA (106) 11.4 0.0114 P8 Cb GC GTAAACCACG (3) 1.6 0.0016 P8 Cb GC GTGGGTGGTA (5) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CACACACACA (106) 32.4 0.0324 Cb medulloblastoma AGACTCCCAG (4) 4.6 0.0046 Cb medulloblastoma ACCAGTCTGA (3) 2.3 0.0023 Cb medulloblastoma GTGGGTGGTA (5) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CACACACACA (106) 6.8 0.0068 P8 GC+1d culture GTGGGTGGTA (5) 3.4 0.0034 P8 GC+1d culture GACCCAGACA (3) 2.3 0.0023 P8 GC+1d culture ACCAGTCTGA (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CACACACACA (106) 9.4 0.0094 P8 GC+SHH+1d culture GTGGGTGGTA (5) 2.3 0.0023 P8 GC+SHH+1d culture AGACTCCCAG (4) 1.2 0.0012 P8 GC+SHH+1d culture GACCCAGACA (3) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts CACACACACA (106) 17.5 0.0175 3T3 fibroblasts GACCCAGACA (3) 3.5 0.0035 3T3 fibroblasts GTGGGTGGTA (5) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CACACACACA (106) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CACACACACA (106) 27.3 0.0273 P1 cortex AGACTCCCAG (4) 4.5 0.0045 Hypothalamus CACACACACA (106) 96 0.096 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GTGGGTGGTA (5) 3.6 0.0036 Hypothalamus ACCAGTCTGA (3) 1.8 0.0018 Hypothalamus AGACTCCCAG (4) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GTGGGTGGTA (5) 9.4 0.0094 E12.5 retina CACACACACA (106) 3.8 0.0038 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina CACACACACA (106) 18.2 0.0182 E14.5 retina GTGGGTGGTA (5) 3.6 0.0036 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CACACACACA (106) 12.7 0.0127 E16.5 retina ACCAGTCTGA (3) 1.8 0.0018 E16.5 retina GTGGGTGGTA (5) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CACACACACA (106) 5.5 0.0055 E18.5 retina ACCAGTCTGA (3) 1.8 0.0018 E18.5 retina GTGGGTGGTA (5) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CACACACACA (106) 7.9 0.0079 P0.5 retina GTGGGTGGTA (5) 5.9 0.0059 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CACACACACA (106) 21.1 0.0211 P2.5 retina GTGGGTGGTA (5) 3.5 0.0035 P2.5 retina ACCAGTCTGA (3) 1.8 0.0018 P2.5 retina GTAAACCACG (3) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CACACACACA (106) 7.9 0.0079 P4.5 retina ACCAGTCTGA (3) 2 0.002 P4.5 retina GTGGGTGGTA (5) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CACACACACA (106) 8.3 0.0083 P6.5 retina ACCAGTCTGA (3) 3.3 0.0033 P6.5 retina GTGGGTGGTA (5) 3.3 0.0033 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GTGGGTGGTA (5) 11.1 0.0111 P10.5 crx- retina CACACACACA (106) 5.6 0.0056 P10.5 crx- retina AGACTCCCAG (4) 1.9 0.0019 P10.5 crx- retina GACCCAGACA (3) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CACACACACA (106) 7.7 0.0077 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CACACACACA (106) 16.7 0.0167 Adult retinal GTAAACCACG (3) 3.7 0.0037 Adult retinal AGACTCCCAG (4) 1.9 0.0019 Adult retinal GACCCAGACA (3) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CACACACACA (106) 21.1 0.0211 ONL GTGGGTGGTA (5) 1.9 0.0019