Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.2121
D12Ertd647e
DNA segment, Chr 12, ERATO Doi 647, expressed
12
12 51.0 cM
52668
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
GCGACAGAGG
(
2
)
6.9
0.0069
Cb medulloblastoma
GGGACAGAGG (
5
)
2.3
0.0023
P8 GC+1d culture
GCGACAGAGG
(
2
)
14.8
0.0148
P8 GC+1d culture
ACACTGGCCA
(
3
)
1.1
0.0011
P8 GC+1d culture
GATCAGAGTG (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GCGACAGAGG
(
2
)
12.9
0.0129
P8 GC+SHH+1d culture
GATCAGAGTG (
2
)
1.2
0.0012
3T3 fibroblasts
GCGACAGAGG
(
2
)
24.5
0.0245
3T3 fibroblasts
GATCAGAGTG (
2
)
3.5
0.0035
3T3 fibroblasts
GCTCCCCCAA (
5
)
3.5
0.0035
P1 cortex
GCGACAGAGG
(
2
)
9.1
0.0091
Hypothalamus
GATCAGAGTG (
2
)
1.8
0.0018
Hypothalamus
GCGACAGAGG
(
2
)
1.8
0.0018
Hypothalamus
GGGACAGAGG (
5
)
1.8
0.0018
E12.5 retina
GATCAGAGTG (
2
)
1.9
0.0019
E14.5 retina
GGGACAGAGG (
5
)
1.8
0.0018
E16.5 retina
GATCAGAGTG (
2
)
1.8
0.0018
E16.5 retina
GCTCCCCCAA (
5
)
1.8
0.0018
P0.5 retina
GCGACAGAGG
(
2
)
2
0.002
P0.5 retina
GGGACAGAGG (
5
)
2
0.002
P2.5 retina
GATCAGAGTG (
2
)
3.5
0.0035
P2.5 retina
GCTCCCCCAA (
5
)
1.8
0.0018
P4.5 retina
GCTCCCCCAA (
5
)
2
0.002
P6.5 retina
GGGACAGAGG (
5
)
11.7
0.0117
P10.5 crx- retina
GGGACAGAGG (
5
)
5.6
0.0056
P10.5 crx- retina
ACACTGGCCA
(
3
)
1.9
0.0019
P10.5 crx- retina
GCGACAGAGG
(
2
)
1.9
0.0019
P10.5 crx+ retina
GGGACAGAGG (
5
)
267.2
0.2672
P10.5 crx+ retina
GATCAGAGTG (
2
)
3.8
0.0038
P10.5 crx+ retina
GCGACAGAGG
(
2
)
3.8
0.0038
Adult retinal
GGGACAGAGG (
5
)
488.8
0.4888
Adult retinal
GCGACAGAGG
(
2
)
3.7
0.0037
Adult retinal
GATCAGAGTG (
2
)
1.9
0.0019
ONL
GGGACAGAGG (
5
)
879.2
0.8792
ONL
GATCAGAGTG (
2
)
9.6
0.0096
