Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21228	2610101J03Rik	RIKEN cDNA 2610101J03 gene	2		66580
Human Homolog	C20orf6[chromosome 20 open reading frame 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAAAAGTT (4) 26.1 0.0261 P8 Cb GC TAGAACTAAT 9.8 0.0098 P8 Cb GC GACTTTCAAG 1.6 0.0016 P8 Cb GC TGTATTTATA (9) 1.6 0.0016 Cb medulloblastoma AATAAAAGTT (4) 53.2 0.0532 P8 GC+1d culture AATAAAAGTT (4) 19.4 0.0194 P8 GC+1d culture TGTATTTATA (9) 8 0.008 P8 GC+1d culture TAGAACTAAT 4.6 0.0046 P8 GC+1d culture GAATTTCAAG (4) 2.3 0.0023 P8 GC+SHH+1d culture AATAAAAGTT (4) 25.8 0.0258 P8 GC+SHH+1d culture TAGAACTAAT 5.9 0.0059 P8 GC+SHH+1d culture GAATTTCAAG (4) 2.3 0.0023 P8 GC+SHH+1d culture TGTATTTATA (9) 1.2 0.0012 E15 cortex AATAAAAGTT (4) 9.9 0.0099 E15 cortex TAGAACTAAT 4.9 0.0049 P1 cortex AATAAAAGTT (4) 9.1 0.0091 P1 cortex TGTATTTATA (9) 4.5 0.0045 Hypothalamus AATAAAAGTT (4) 21.7 0.0217 Hypothalamus TAGAACTAAT 5.4 0.0054 Hypothalamus TGTATTTATA (9) 3.6 0.0036 E12.5 retina AATAAAAGTT (4) 24.4 0.0244 E12.5 retina TGTATTTATA (9) 13.1 0.0131 E12.5 retina GACTTTCAAG 1.9 0.0019 E12.5 retina TAGAACTAAT 1.9 0.0019 E14.5 retina AATAAAAGTT (4) 18.2 0.0182 E14.5 retina TGTATTTATA (9) 9.1 0.0091 E14.5 retina TAGAACTAAT 1.8 0.0018 E16.5 retina AATAAAAGTT (4) 25.4 0.0254 E16.5 retina TGTATTTATA (9) 16.3 0.0163 E16.5 retina TAGAACTAAT 9.1 0.0091 E18.5 retina AATAAAAGTT (4) 29.1 0.0291 E18.5 retina TGTATTTATA (9) 16.4 0.0164 E18.5 retina TAGAACTAAT 3.6 0.0036 P0.5 retina AATAAAAGTT (4) 11.8 0.0118 P0.5 retina GAATTTCAAG (4) 3.9 0.0039 P0.5 retina TGTATTTATA (9) 2 0.002 P2.5 retina AATAAAAGTT (4) 17.6 0.0176 P2.5 retina TGTATTTATA (9) 15.8 0.0158 P2.5 retina TAGAACTAAT 8.8 0.0088 P2.5 retina GAATTTCAAG (4) 1.8 0.0018 P2.5 retina GACTTTCAAG 1.8 0.0018 P4.5 retina AATAAAAGTT (4) 35.7 0.0357 P4.5 retina TGTATTTATA (9) 9.9 0.0099 P4.5 retina TAGAACTAAT 2 0.002 P6.5 retina AATAAAAGTT (4) 23.3 0.0233 P6.5 retina TAGAACTAAT 6.7 0.0067 P6.5 retina TGTATTTATA (9) 3.3 0.0033 P6.5 retina GACTTTCAAG 1.7 0.0017 P10.5 crx- retina AATAAAAGTT (4) 37.2 0.0372 P10.5 crx- retina TGTATTTATA (9) 5.6 0.0056 P10.5 crx- retina TAGAACTAAT 1.9 0.0019 P10.5 crx+ retina AATAAAAGTT (4) 40.4 0.0404 P10.5 crx+ retina TGTATTTATA (9) 3.8 0.0038 P10.5 crx+ retina TAGAACTAAT 1.9 0.0019 Adult retinal AATAAAAGTT (4) 9.3 0.0093 ONL AATAAAAGTT (4) 15.3 0.0153 ONL TGTATTTATA (9) 9.6 0.0096 ONL GAATTTCAAG (4) 1.9 0.0019