Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.212411
Phf14
PHD finger protein 14
6
75725
Gene Ontology
DNA binding
|
regulation of transcription, DNA-dependent
Human Homolog
PHF14[PHD finger protein 14]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 72 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACACACACA (
106
)
11.4
0.0114
P8 Cb GC
GAGCAGAAAA
(
2
)
4.9
0.0049
P8 Cb GC
TCCATTGCTG (
5
)
4.9
0.0049
P8 Cb GC
TTGCAAAACT (
2
)
3.3
0.0033
P8 Cb GC
GATGGAAAGC
1.6
0.0016
P8 Cb GC
GTTAAGGTAT
1.6
0.0016
Cb medulloblastoma
CACACACACA (
106
)
32.4
0.0324
Cb medulloblastoma
TCCATTGCTG (
5
)
6.9
0.0069
Cb medulloblastoma
GCCAATGAAC
4.6
0.0046
Cb medulloblastoma
GAGCAGAAAA
(
2
)
2.3
0.0023
P8 GC+1d culture
CACACACACA (
106
)
6.8
0.0068
P8 GC+1d culture
GAGCAGAAAA
(
2
)
6.8
0.0068
P8 GC+1d culture
TCCATTGCTG (
5
)
3.4
0.0034
P8 GC+SHH+1d culture
CACACACACA (
106
)
9.4
0.0094
P8 GC+SHH+1d culture
GAGCAGAAAA
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
GATGGAAAGC
1.2
0.0012
P8 GC+SHH+1d culture
TAATTTTTCT (
3
)
1.2
0.0012
3T3 fibroblasts
CACACACACA (
106
)
17.5
0.0175
3T3 fibroblasts
GATGGAAAGC
3.5
0.0035
E15 cortex
CACACACACA (
106
)
4.9
0.0049
E15 cortex
GAGCAGAAAA
(
2
)
4.9
0.0049
E15 cortex
GTTAAGGTAT
4.9
0.0049
E15 cortex
TTGCAAAACT (
2
)
4.9
0.0049
P1 cortex
CACACACACA (
106
)
27.3
0.0273
P1 cortex
TCCATTGCTG (
5
)
4.5
0.0045
Hypothalamus
CACACACACA (
106
)
96
0.096
Hypothalamus
CTGAGCTTGG
(
2
)
1.8
0.0018
Hypothalamus
TAATTTTTCT (
3
)
1.8
0.0018
E12.5 retina
CACACACACA (
106
)
3.8
0.0038
E12.5 retina
TCCATTGCTG (
5
)
3.8
0.0038
E12.5 retina
GAAACCTTAC
(
7
)
1.9
0.0019
E12.5 retina
GAGCAGAAAA
(
2
)
1.9
0.0019
E14.5 retina
CACACACACA (
106
)
18.2
0.0182
E14.5 retina
GAGCAGAAAA
(
2
)
9.1
0.0091
E16.5 retina
CACACACACA (
106
)
12.7
0.0127
E16.5 retina
GAGCAGAAAA
(
2
)
10.9
0.0109
E16.5 retina
GAAACCTTAC
(
7
)
3.6
0.0036
E16.5 retina
GTTAAGGTAT
1.8
0.0018
E18.5 retina
CACACACACA (
106
)
5.5
0.0055
E18.5 retina
GAGCAGAAAA
(
2
)
3.6
0.0036
E18.5 retina
CTGAGCTTGG
(
2
)
1.8
0.0018
P0.5 retina
GAGCAGAAAA
(
2
)
9.8
0.0098
P0.5 retina
CACACACACA (
106
)
7.9
0.0079
P0.5 retina
TCCATTGCTG (
5
)
5.9
0.0059
P2.5 retina
CACACACACA (
106
)
21.1
0.0211
P2.5 retina
GAGCAGAAAA
(
2
)
3.5
0.0035
P2.5 retina
CTGAGCTTGG
(
2
)
1.8
0.0018
P2.5 retina
TAATTTTTCT (
3
)
1.8
0.0018
P2.5 retina
TCCATTGCTG (
5
)
1.8
0.0018
P4.5 retina
CACACACACA (
106
)
7.9
0.0079
P4.5 retina
TCCATTGCTG (
5
)
5.9
0.0059
P4.5 retina
CTGAGCTTGG
(
2
)
4
0.004
P4.5 retina
GAGCAGAAAA
(
2
)
4
0.004
P4.5 retina
GTTAAGGTAT
2
0.002
P4.5 retina
TTGCAAAACT (
2
)
2
0.002
P6.5 retina
CACACACACA (
106
)
8.3
0.0083
P6.5 retina
TCCATTGCTG (
5
)
3.3
0.0033
P6.5 retina
CTGAGCTTGG
(
2
)
1.7
0.0017
P6.5 retina
GTTAAGGTAT
1.7
0.0017
P10.5 crx- retina
TCCATTGCTG (
5
)
9.3
0.0093
P10.5 crx- retina
CACACACACA (
106
)
5.6
0.0056
P10.5 crx- retina
GAGCAGAAAA
(
2
)
5.6
0.0056
P10.5 crx+ retina
CACACACACA (
106
)
7.7
0.0077
P10.5 crx+ retina
GAAACCTTAC
(
7
)
1.9
0.0019
Adult retinal
CACACACACA (
106
)
16.7
0.0167
Adult retinal
TCCATTGCTG (
5
)
9.3
0.0093
Adult retinal
GAGCAGAAAA
(
2
)
3.7
0.0037
Adult retinal
GATGGAAAGC
1.9
0.0019
ONL
CACACACACA (
106
)
21.1
0.0211
ONL
TCCATTGCTG (
5
)
3.8
0.0038
ONL
CTGAGCTTGG
(
2
)
1.9
0.0019
ONL
GAGCAGAAAA
(
2
)
1.9
0.0019
