Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.212549	Hist3h2a	histone 3, H2a	11		319162
Human Homolog	HIST3H2A[histone 3, H2a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAAAAAAAA (80) 13.1 0.0131 P8 Cb GC TTCCAGTCTT (3) 6.5 0.0065 P8 Cb GC TTCAAGTCTT 3.3 0.0033 P8 Cb GC ACGAATGGTT 1.6 0.0016 P8 Cb GC TTCAAGTTTT (4) 1.6 0.0016 Cb medulloblastoma TTAAAAAAAA (80) 53.2 0.0532 Cb medulloblastoma TTCAAGTCTT 6.9 0.0069 Cb medulloblastoma ACGAATGGTT 4.6 0.0046 Cb medulloblastoma TTCAAGTTTT (4) 4.6 0.0046 Cb medulloblastoma TTCCAGTCTT (3) 2.3 0.0023 P8 GC+1d culture TTAAAAAAAA (80) 28.5 0.0285 P8 GC+1d culture TTCCAGTCTT (3) 9.1 0.0091 P8 GC+1d culture TTCAAGTCTT 3.4 0.0034 P8 GC+1d culture TCAATTTAAC 2.3 0.0023 P8 GC+1d culture ACGAATGGTT 1.1 0.0011 P8 GC+1d culture ATCCATTCCT (2) 1.1 0.0011 P8 GC+1d culture TTCAAGTTTT (4) 1.1 0.0011 P8 GC+SHH+1d culture TTAAAAAAAA (80) 34 0.034 P8 GC+SHH+1d culture TTCCAGTCTT (3) 4.7 0.0047 P8 GC+SHH+1d culture GCGGTCGGCA (12) 3.5 0.0035 P8 GC+SHH+1d culture ACGAATGGTT 1.2 0.0012 P8 GC+SHH+1d culture TCAATTTAAC 1.2 0.0012 P8 GC+SHH+1d culture TTCAAGTCTT 1.2 0.0012 P8 GC+SHH+1d culture TTCAAGTTTT (4) 1.2 0.0012 3T3 fibroblasts TTCAAGTTTT (4) 3.5 0.0035 E15 cortex ACGAATGGTT 4.9 0.0049 E15 cortex TTAAAAAAAA (80) 4.9 0.0049 P1 cortex TTAAAAAAAA (80) 13.6 0.0136 P1 cortex TTCAAGTTTT (4) 4.5 0.0045 Hypothalamus TTAAAAAAAA (80) 19.9 0.0199 Hypothalamus ACGAATGGTT 3.6 0.0036 Hypothalamus TCGTTGTGGG (14) 1.8 0.0018 Hypothalamus TTCAAGTCTT 1.8 0.0018 Hypothalamus TTCAAGTTTT (4) 1.8 0.0018 E12.5 retina TTAAAAAAAA (80) 11.3 0.0113 E12.5 retina TTCAAGTTTT (4) 11.3 0.0113 E12.5 retina TTCAAGTCTT 5.6 0.0056 E12.5 retina GCGGTCGGCA (12) 1.9 0.0019 E14.5 retina TTCAAGTTTT (4) 25.5 0.0255 E14.5 retina TTAAAAAAAA (80) 16.4 0.0164 E14.5 retina TTCAAGTCTT 3.6 0.0036 E14.5 retina ACGAATGGTT 1.8 0.0018 E14.5 retina ATCCATTCCT (2) 1.8 0.0018 E16.5 retina TTCAAGTTTT (4) 18.1 0.0181 E16.5 retina TTAAAAAAAA (80) 16.3 0.0163 E16.5 retina TTCAAGTCTT 3.6 0.0036 E16.5 retina TCAATTTAAC 1.8 0.0018 E18.5 retina TTAAAAAAAA (80) 50.9 0.0509 E18.5 retina TTCAAGTTTT (4) 38.2 0.0382 E18.5 retina TTCAAGTCTT 7.3 0.0073 E18.5 retina TCGTTGTGGG (14) 1.8 0.0018 P0.5 retina TTCAAGTTTT (4) 21.6 0.0216 P0.5 retina TTAAAAAAAA (80) 17.7 0.0177 P0.5 retina TTCAAGTCTT 3.9 0.0039 P2.5 retina TTAAAAAAAA (80) 40.5 0.0405 P2.5 retina TTCAAGTTTT (4) 14.1 0.0141 P2.5 retina TCGTTGTGGG (14) 3.5 0.0035 P2.5 retina TTCAAGTCTT 1.8 0.0018 P4.5 retina TTAAAAAAAA (80) 47.6 0.0476 P4.5 retina TTCAAGTTTT (4) 15.9 0.0159 P4.5 retina TTCAAGTCTT 2 0.002 P6.5 retina TTAAAAAAAA (80) 16.7 0.0167 P6.5 retina ACGAATGGTT 1.7 0.0017 P6.5 retina ATCCATTCCT (2) 1.7 0.0017 P6.5 retina TTCAAGTTTT (4) 1.7 0.0017 P10.5 crx- retina TTAAAAAAAA (80) 13 0.013 P10.5 crx- retina TTCCAGTCTT (3) 11.1 0.0111 P10.5 crx- retina ACGAATGGTT 5.6 0.0056 P10.5 crx- retina TCAATTTAAC 1.9 0.0019 P10.5 crx- retina TTCAAGTTTT (4) 1.9 0.0019 P10.5 crx+ retina TTCCAGTCTT (3) 11.5 0.0115 P10.5 crx+ retina TTAAAAAAAA (80) 5.8 0.0058 P10.5 crx+ retina ATCCATTCCT (2) 1.9 0.0019 P10.5 crx+ retina TCAATTTAAC 1.9 0.0019 Adult retinal TTAAAAAAAA (80) 7.4 0.0074 Adult retinal ACGAATGGTT 5.6 0.0056 Adult retinal TTCAAGTTTT (4) 3.7 0.0037 Adult retinal TTCAAGTCTT 1.9 0.0019 ONL TTCAAGTCTT 9.6 0.0096 ONL TTAAAAAAAA (80) 7.7 0.0077 ONL ACGAATGGTT 1.9 0.0019 ONL TCAATTTAAC 1.9 0.0019