Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.212609	6030443O07Rik	RIKEN cDNA 6030443O07 gene	19		226151
Human Homolog	C10orf6[chromosome 10 open reading frame 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC GTTTTTATCC (3) 3.3 0.0033 P8 Cb GC GAATATGCTC (2) 1.6 0.0016 P8 Cb GC GGCCAGTTTA (2) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TGAGTGTGTG (7) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture CGTGGTGTGA (2) 1.1 0.0011 P8 GC+1d culture GAATATGCTC (2) 1.1 0.0011 P8 GC+1d culture GGCCAGTTTA (2) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GGCCAGTTTA (2) 3.5 0.0035 P8 GC+SHH+1d culture CGTGGTGTGA (2) 1.2 0.0012 P8 GC+SHH+1d culture CTCAAGATCA (2) 1.2 0.0012 P8 GC+SHH+1d culture GAATATGCTC (2) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts CGTGGTGTGA (2) 3.5 0.0035 3T3 fibroblasts CTCAAGATCA (2) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex CGTGGTGTGA (2) 4.9 0.0049 E15 cortex CTCAAGATCA (2) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex TAAAAAAAAA (196) 50 0.05 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus CTCAAGATCA (2) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina CTCAAGATCA (2) 1.9 0.0019 E12.5 retina GTTTTTAATC 1.9 0.0019 E12.5 retina TGAGTGTGTG (7) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TGAGTGTGTG (7) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina CGTGGTGTGA (2) 1.8 0.0018 E16.5 retina GTTTTTAATC 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina CTCAAGATCA (2) 5.5 0.0055 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina CTCAAGATCA (2) 5.9 0.0059 P0.5 retina GAATATGCTC (2) 2 0.002 P0.5 retina GTTTTTATCC (3) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina GAATATGCTC (2) 3.5 0.0035 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GAATATGCTC (2) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina CTCAAGATCA (2) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina GAATATGCTC (2) 1.9 0.0019 P10.5 crx- retina TGAGTGTGTG (7) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina CTCAAGATCA (2) 1.9 0.0019 P10.5 crx+ retina TGAGTGTGTG (7) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal CTCAAGATCA (2) 1.9 0.0019 Adult retinal GTTTTTAATC 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL CTCAAGATCA (2) 5.7 0.0057 ONL GGCCAGTTTA (2) 1.9 0.0019