Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2128	S100a9	S100 calcium binding protein A9 (calgranulin B)	3	3 43.6 cM	20202
Gene Ontology	calcium ion binding
Human Homolog	S100A9[S100 calcium binding protein A9 (calgranulin B)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC GAGGACCTGG (8) 24.5 0.0245 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TGACTGCTGC (3) 6.9 0.0069 Cb medulloblastoma GAGGACCTGG (8) 4.6 0.0046 Cb medulloblastoma TGACAGCTGC (5) 4.6 0.0046 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture GAGGACCTGG (8) 13.7 0.0137 P8 GC+1d culture TGACTGCTGC (3) 4.6 0.0046 P8 GC+1d culture TGACAGCTGC (5) 3.4 0.0034 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture GAGGACCTGG (8) 22.2 0.0222 P8 GC+SHH+1d culture TGACTGCTGC (3) 2.3 0.0023 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts GAGGACCTGG (8) 3.5 0.0035 E15 cortex GAGGACCTGG (8) 24.7 0.0247 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 E15 cortex TGACAACTGG (4) 4.9 0.0049 E15 cortex TGACTGCTGC (3) 4.9 0.0049 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex GAGGACCTGG (8) 13.6 0.0136 P1 cortex GCAAAGGCTG 4.5 0.0045 P1 cortex TGACTGCTGC (3) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus GAGGACCTGG (8) 7.2 0.0072 Hypothalamus TGACTGCTGC (3) 3.6 0.0036 Hypothalamus TGACAGCTGC (5) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina GAGGACCTGG (8) 11.3 0.0113 E12.5 retina TGACTGCTGC (3) 3.8 0.0038 E12.5 retina TGACAGCTGC (5) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina GAGGACCTGG (8) 10.9 0.0109 E14.5 retina TGACAACTGG (4) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina GAGGACCTGG (8) 18.1 0.0181 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina GAGGACCTGG (8) 12.7 0.0127 E18.5 retina TGACTGCTGC (3) 5.5 0.0055 E18.5 retina GCAAAGGCTG 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina GAGGACCTGG (8) 15.7 0.0157 P0.5 retina TGACTGCTGC (3) 3.9 0.0039 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina GAGGACCTGG (8) 22.9 0.0229 P2.5 retina TGACTGCTGC (3) 5.3 0.0053 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina GAGGACCTGG (8) 25.8 0.0258 P4.5 retina GCAAAGGCTG 2 0.002 P4.5 retina TGACTGCTGC (3) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina GAGGACCTGG (8) 10 0.01 P6.5 retina TGACTGCTGC (3) 8.3 0.0083 P6.5 retina GCAAAGGCTG 1.7 0.0017 P6.5 retina TGACAACTGG (4) 1.7 0.0017 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina GAGGACCTGG (8) 7.4 0.0074 P10.5 crx- retina TGACTGCTGC (3) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TGACTGCTGC (3) 15.4 0.0154 P10.5 crx+ retina GAGGACCTGG (8) 5.8 0.0058 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal GAGGACCTGG (8) 7.4 0.0074 Adult retinal TGACTGCTGC (3) 3.7 0.0037 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL GAGGACCTGG (8) 3.8 0.0038 ONL TGACTGCTGC (3) 1.9 0.0019