Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.213003	Myd88	myeloid differentiation primary response gene 88	9	9 70.0 cM	17874
Gene Ontology	cell surface receptor linked signal transduction | cytoplasm | immune response | inflammatory response | membrane | NIK-I-kappaB/NF-kappaB cascade | positive regulation of tumor necrosis factor-alpha biosynthesis | protein binding | response to virus | signal transduction | transmembrane receptor activity | transmembrane receptor protein serine/threonine kinase signaling pathway
Human Homolog	MYD88[myeloid differentiation primary response gene (88)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGTGGTGG (7) 4.9 0.0049 Cb medulloblastoma TTTGTACTTT (3) 16.2 0.0162 Cb medulloblastoma ATAGCATTTG 2.3 0.0023 Cb medulloblastoma GTGGTGGTGG (7) 2.3 0.0023 P8 GC+1d culture TTTGTACTTT (3) 5.7 0.0057 P8 GC+1d culture GATACTGGAA (2) 2.3 0.0023 P8 GC+SHH+1d culture TTTGTACTTT (3) 8.2 0.0082 P8 GC+SHH+1d culture GATACTGGAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGAATGTCAA (2) 1.2 0.0012 P1 cortex GGAATGTCAA (2) 4.5 0.0045 Hypothalamus TTTGTACTTT (3) 5.4 0.0054 Hypothalamus GGAATGTCAA (2) 1.8 0.0018 Hypothalamus GTGGTGGTGG (7) 1.8 0.0018 E12.5 retina GTGGTGGTGG (7) 1.9 0.0019 E12.5 retina TTTGTACTTT (3) 1.9 0.0019 E14.5 retina TTTGTACTTT (3) 1.8 0.0018 E16.5 retina ATAGCATTTG 1.8 0.0018 E16.5 retina GGAATGTCAA (2) 1.8 0.0018 E16.5 retina GTGGTGGTGG (7) 1.8 0.0018 E18.5 retina TTTGTACTTT (3) 1.8 0.0018 P6.5 retina TTTGTACTTT (3) 3.3 0.0033 P6.5 retina GTGGTGGTGG (7) 1.7 0.0017 P10.5 crx- retina GTGGTGGTGG (7) 3.7 0.0037 P10.5 crx- retina GATACTGGAA (2) 1.9 0.0019 P10.5 crx- retina TTTGTACTTT (3) 1.9 0.0019 P10.5 crx+ retina GTGGTGGTGG (7) 1.9 0.0019 Adult retinal GTGGTGGTGG (7) 1.9 0.0019 ONL GTGGTGGTGG (7) 3.8 0.0038 ONL ATAGCATTTG 1.9 0.0019 ONL GGAATGTCAA (2) 1.9 0.0019