Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.213292	Nit2	nitrilase family, member 2	16	16 38.0 cM	52633
Gene Ontology	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | mitochondrion | nitrogen metabolism
Human Homolog	NIT2[nitrilase family, member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAATTCACA 6.5 0.0065 P8 Cb GC CAAATAAAAA (6) 4.9 0.0049 P8 Cb GC TTTGAAACTG (4) 4.9 0.0049 P8 Cb GC ACACTTTTAA (2) 1.6 0.0016 Cb medulloblastoma TAAATTCACA 20.8 0.0208 Cb medulloblastoma CAAATAAAAA (6) 6.9 0.0069 Cb medulloblastoma ACACTTTTAA (2) 2.3 0.0023 P8 GC+1d culture TAAATTCACA 8 0.008 P8 GC+1d culture TTTGAAACTG (4) 2.3 0.0023 P8 GC+1d culture ACACTTTTAA (2) 1.1 0.0011 P8 GC+1d culture CAAATAAAAA (6) 1.1 0.0011 P8 GC+1d culture TTAATTCTAT 1.1 0.0011 P8 GC+SHH+1d culture TAAATTCACA 11.7 0.0117 P8 GC+SHH+1d culture CAAATAAAAA (6) 4.7 0.0047 P8 GC+SHH+1d culture TTAATTCTAT 4.7 0.0047 P8 GC+SHH+1d culture ACACTTTTAA (2) 1.2 0.0012 P8 GC+SHH+1d culture CAAACTAAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTCAGTGTT (4) 1.2 0.0012 P8 GC+SHH+1d culture TAATCAGAAT 1.2 0.0012 E15 cortex CAAATAAAAA (6) 4.9 0.0049 E15 cortex TTTGAAACTG (4) 4.9 0.0049 P1 cortex CAAATAAAAA (6) 4.5 0.0045 P1 cortex TAAATTCACA 4.5 0.0045 P1 cortex TTTGAAACTG (4) 4.5 0.0045 Hypothalamus TAAATTCACA 18.1 0.0181 Hypothalamus CAAATAAAAA (6) 3.6 0.0036 Hypothalamus CTTCAGTGTT (4) 1.8 0.0018 E12.5 retina CAAATAAAAA (6) 11.3 0.0113 E12.5 retina TAAATTCACA 9.4 0.0094 E12.5 retina ACACTTTTAA (2) 1.9 0.0019 E14.5 retina TAAATTCACA 9.1 0.0091 E14.5 retina CAAATAAAAA (6) 3.6 0.0036 E14.5 retina TTTGAAACTG (4) 3.6 0.0036 E14.5 retina ACACTTTTAA (2) 1.8 0.0018 E14.5 retina CTTCAGTGTT (4) 1.8 0.0018 E16.5 retina ACACTTTTAA (2) 5.4 0.0054 E16.5 retina TAAATTCACA 5.4 0.0054 E16.5 retina TTTGAAACTG (4) 5.4 0.0054 E16.5 retina CAAATAAAAA (6) 3.6 0.0036 E16.5 retina CTTCAGTGTT (4) 1.8 0.0018 E18.5 retina CAAATAAAAA (6) 10.9 0.0109 E18.5 retina CAAACTAAAA (2) 3.6 0.0036 E18.5 retina TAAATTCACA 3.6 0.0036 E18.5 retina TTAATTCTAT 1.8 0.0018 E18.5 retina TTTGAAACTG (4) 1.8 0.0018 P0.5 retina TAAATTCACA 3.9 0.0039 P0.5 retina CAAATAAAAA (6) 2 0.002 P0.5 retina TGCTAAACCA 2 0.002 P0.5 retina TTTGAAACTG (4) 2 0.002 P2.5 retina TAAATTCACA 12.3 0.0123 P2.5 retina TTTGAAACTG (4) 5.3 0.0053 P2.5 retina CAAATAAAAA (6) 1.8 0.0018 P4.5 retina TAAATTCACA 15.9 0.0159 P4.5 retina ACACTTTTAA (2) 7.9 0.0079 P4.5 retina CAAATAAAAA (6) 5.9 0.0059 P4.5 retina TGCTAAACCA 4 0.004 P6.5 retina TAAATTCACA 15 0.015 P6.5 retina CAAATAAAAA (6) 10 0.01 P6.5 retina ACACTTTTAA (2) 6.7 0.0067 P6.5 retina TTTGAAACTG (4) 6.7 0.0067 P6.5 retina TGCTAAACCA 1.7 0.0017 P6.5 retina TTAATTCTAT 1.7 0.0017 P10.5 crx- retina TAAATTCACA 11.1 0.0111 P10.5 crx- retina TTTGAAACTG (4) 11.1 0.0111 P10.5 crx- retina ACACTTTTAA (2) 3.7 0.0037 P10.5 crx- retina TAATCAGAAT 1.9 0.0019 P10.5 crx- retina TGCTAAACCA 1.9 0.0019 P10.5 crx- retina TTAATTCTAT 1.9 0.0019 P10.5 crx+ retina TAAATTCACA 15.4 0.0154 P10.5 crx+ retina ACACTTTTAA (2) 1.9 0.0019 P10.5 crx+ retina CAAATAAAAA (6) 1.9 0.0019 P10.5 crx+ retina TAATCAGAAT 1.9 0.0019 P10.5 crx+ retina TTTGAAACTG (4) 1.9 0.0019 Adult retinal TAAATTCACA 5.6 0.0056 Adult retinal CAAATAAAAA (6) 1.9 0.0019 Adult retinal CTTCAGTGTT (4) 1.9 0.0019 Adult retinal TTAATTCTAT 1.9 0.0019 Adult retinal TTTGAAACTG (4) 1.9 0.0019 ONL TAAATTCACA 7.7 0.0077 ONL ACACTTTTAA (2) 3.8 0.0038 ONL CAAATAAAAA (6) 1.9 0.0019 ONL TAATCAGAAT 1.9 0.0019