Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2137	Sin3b	transcriptional regulator, SIN3B (yeast)	8	8 33.0 cM (8 33.0 cM)	20467
Gene Ontology	nucleus | protein binding | regulation of transcription, DNA-dependent
Human Homolog	SIN3B[SIN3 homolog B, transcriptional regulator (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGTGGATT (3) 11.4 0.0114 P8 Cb GC ATGGTGATGT (5) 1.6 0.0016 P8 Cb GC CTTCTGGGGA (2) 1.6 0.0016 Cb medulloblastoma ATGGTGATGT (5) 13.9 0.0139 Cb medulloblastoma ATGGTGGATT (3) 4.6 0.0046 Cb medulloblastoma CAAGTGTGCC (3) 2.3 0.0023 Cb medulloblastoma CTTCTGGGGA (2) 2.3 0.0023 Cb medulloblastoma GCCCTGAAGA (7) 2.3 0.0023 P8 GC+1d culture ATGGTGGATT (3) 13.7 0.0137 P8 GC+1d culture AAGGAATTCA (2) 1.1 0.0011 P8 GC+1d culture CTGGGCTCTG (7) 1.1 0.0011 P8 GC+1d culture GGTGATGAGC 1.1 0.0011 P8 GC+SHH+1d culture ATGGTGGATT (3) 21.1 0.0211 P8 GC+SHH+1d culture AAGGAATTCA (2) 1.2 0.0012 P8 GC+SHH+1d culture CAAGTGTGCC (3) 1.2 0.0012 P8 GC+SHH+1d culture CCAAACCCAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GATCCTTTGA 1.2 0.0012 3T3 fibroblasts CTGGGCTCTG (7) 14 0.014 3T3 fibroblasts ATGGTGGATT (3) 7 0.007 3T3 fibroblasts ATGGTGATGT (5) 3.5 0.0035 E15 cortex ATGGTGATGT (5) 9.9 0.0099 E15 cortex ATGGTGGATT (3) 4.9 0.0049 E15 cortex CTGGGCTCTG (7) 4.9 0.0049 P1 cortex TCTGAAGAGG (6) 9.1 0.0091 P1 cortex ATGGTGATGT (5) 4.5 0.0045 P1 cortex CTGGGCTCTG (7) 4.5 0.0045 Hypothalamus ATGGTGATGT (5) 3.6 0.0036 Hypothalamus ATGGTGGATT (3) 3.6 0.0036 Hypothalamus CTTCTGGGGA (2) 3.6 0.0036 E12.5 retina ATGGTGATGT (5) 7.5 0.0075 E12.5 retina CTGGGCTCTG (7) 3.8 0.0038 E12.5 retina ATGGTGGATT (3) 1.9 0.0019 E12.5 retina GGTGATGAGC 1.9 0.0019 E14.5 retina ATGGTGGATT (3) 10.9 0.0109 E14.5 retina ATGGTGATGT (5) 7.3 0.0073 E14.5 retina AGCACCCTGA (4) 1.8 0.0018 E14.5 retina GGTGATGAGC 1.8 0.0018 E16.5 retina ATGGTGGATT (3) 16.3 0.0163 E16.5 retina ATGGTGATGT (5) 7.2 0.0072 E16.5 retina AAGGAATTCA (2) 1.8 0.0018 E16.5 retina CAAGTGTGCC (3) 1.8 0.0018 E16.5 retina GATCCTTTGA 1.8 0.0018 E18.5 retina ATGGTGGATT (3) 7.3 0.0073 E18.5 retina ATGGTGATGT (5) 5.5 0.0055 E18.5 retina CAAGTGTGCC (3) 1.8 0.0018 P0.5 retina ATGGTGGATT (3) 25.5 0.0255 P2.5 retina ATGGTGGATT (3) 10.6 0.0106 P2.5 retina ATGGTGATGT (5) 5.3 0.0053 P2.5 retina CTTCTGGGGA (2) 3.5 0.0035 P2.5 retina AGCACCCTGA (4) 1.8 0.0018 P2.5 retina CCAAACCCAA (2) 1.8 0.0018 P2.5 retina GATCCTTTGA 1.8 0.0018 P2.5 retina GCCCTGAAGA (7) 1.8 0.0018 P4.5 retina ATGGTGGATT (3) 19.8 0.0198 P4.5 retina CCAAACCCAA (2) 2 0.002 P4.5 retina CTGGGCTCTG (7) 2 0.002 P4.5 retina TCTGAAGAGG (6) 2 0.002 P6.5 retina ATGGTGGATT (3) 11.7 0.0117 P6.5 retina CTTCTGGGGA (2) 3.3 0.0033 P6.5 retina CCAAACCCAA (2) 1.7 0.0017 P6.5 retina TCTGAAGAGG (6) 1.7 0.0017 P10.5 crx- retina ATGGTGGATT (3) 40.9 0.0409 P10.5 crx- retina AAGGAATTCA (2) 1.9 0.0019 P10.5 crx- retina CTTCTGGGGA (2) 1.9 0.0019 P10.5 crx+ retina ATGGTGGATT (3) 9.6 0.0096 P10.5 crx+ retina CCAAACCCAA (2) 3.8 0.0038 P10.5 crx+ retina AAGGAATTCA (2) 1.9 0.0019 P10.5 crx+ retina CTTCTGGGGA (2) 1.9 0.0019 P10.5 crx+ retina GGTGATGAGC 1.9 0.0019 Adult retinal ATGGTGATGT (5) 3.7 0.0037 Adult retinal CTTCTGGGGA (2) 3.7 0.0037 Adult retinal AAGGAATTCA (2) 1.9 0.0019 Adult retinal ATGGTGGATT (3) 1.9 0.0019 Adult retinal CTGGGCTCTG (7) 1.9 0.0019 ONL ATGGTGGATT (3) 3.8 0.0038 ONL CTGGGCTCTG (7) 3.8 0.0038 ONL AGCACCCTGA (4) 1.9 0.0019 ONL GATCCTTTGA 1.9 0.0019