Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21421	Sumf1	sulfatase modifying factor 1	6		58911
Mm.21421	A430109H19Rik	RIKEN cDNA A430109H19 gene	6		78594
Mm.21421	Rpl36	ribosomal protein L36	17		54217
Gene Ontology	intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | structural constituent of ribosome
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGAAGGCGG (5) 194.1 0.1941 P8 Cb GC TACTATGTCA (3) 3.3 0.0033 P8 Cb GC TTTTTCTTTA (9) 3.3 0.0033 Cb medulloblastoma AGGAAGGCGG (5) 134.1 0.1341 Cb medulloblastoma GCTGATGCTC (5) 4.6 0.0046 Cb medulloblastoma CCTTCTCCTT (7) 2.3 0.0023 P8 GC+1d culture AGGAAGGCGG (5) 154.1 0.1541 P8 GC+1d culture GCTGATGCTC (5) 5.7 0.0057 P8 GC+1d culture TACTATGTCA (3) 3.4 0.0034 P8 GC+1d culture GGAGAAAAAG (6) 1.1 0.0011 P8 GC+1d culture TTTTTCTTTA (9) 1.1 0.0011 P8 GC+SHH+1d culture AGGAAGGCGG (5) 185 0.185 P8 GC+SHH+1d culture GCTGATGCTC (5) 3.5 0.0035 P8 GC+SHH+1d culture TACTATGTCA (3) 1.2 0.0012 3T3 fibroblasts AGGAAGGCGG (5) 161.2 0.1612 3T3 fibroblasts AGGAAGCGGC (3) 3.5 0.0035 E15 cortex AGGAAGGCGG (5) 346.3 0.3463 E15 cortex GGAGAAAAAG (6) 4.9 0.0049 P1 cortex AGGAAGGCGG (5) 45.5 0.0455 Hypothalamus AGGAAGGCGG (5) 110.5 0.1105 Hypothalamus TTTTTCTTTA (9) 3.6 0.0036 Hypothalamus CCTTCTCCTT (7) 1.8 0.0018 E12.5 retina AGGAAGGCGG (5) 191.5 0.1915 E12.5 retina GCTGATGCTC (5) 5.6 0.0056 E12.5 retina TACTATGTCA (3) 1.9 0.0019 E14.5 retina AGGAAGGCGG (5) 196.8 0.1968 E14.5 retina TACTATGTCA (3) 5.5 0.0055 E14.5 retina AGGAAGCGGC (3) 1.8 0.0018 E16.5 retina AGGAAGGCGG (5) 210.1 0.2101 E16.5 retina GCTGATGCTC (5) 3.6 0.0036 E16.5 retina TACTATGTCA (3) 1.8 0.0018 E16.5 retina TTTTTCTTTA (9) 1.8 0.0018 E18.5 retina AGGAAGGCGG (5) 247.4 0.2474 E18.5 retina TACTATGTCA (3) 3.6 0.0036 E18.5 retina GCTGATGCTC (5) 1.8 0.0018 E18.5 retina GGAGAAAAAG (6) 1.8 0.0018 P0.5 retina AGGAAGGCGG (5) 157 0.157 P0.5 retina AGGAAGCGGC (3) 2 0.002 P0.5 retina CCTTCTCCTT (7) 2 0.002 P0.5 retina GCTGATGCTC (5) 2 0.002 P0.5 retina TACTATGTCA (3) 2 0.002 P2.5 retina AGGAAGGCGG (5) 163.7 0.1637 P2.5 retina GCTGATGCTC (5) 5.3 0.0053 P2.5 retina TACTATGTCA (3) 1.8 0.0018 P4.5 retina AGGAAGGCGG (5) 144.6 0.1446 P4.5 retina GCTGATGCTC (5) 2 0.002 P4.5 retina TTTTTCTTTA (9) 2 0.002 P6.5 retina AGGAAGGCGG (5) 130.1 0.1301 P6.5 retina TACTATGTCA (3) 6.7 0.0067 P6.5 retina GCTGATGCTC (5) 3.3 0.0033 P6.5 retina AGGAAGCGGC (3) 1.7 0.0017 P10.5 crx- retina AGGAAGGCGG (5) 133.8 0.1338 P10.5 crx- retina TTTTTCTTTA (9) 1.9 0.0019 P10.5 crx+ retina AGGAAGGCGG (5) 190.3 0.1903 P10.5 crx+ retina TACTATGTCA (3) 3.8 0.0038 P10.5 crx+ retina GCTGATGCTC (5) 1.9 0.0019 Adult retinal AGGAAGGCGG (5) 40.7 0.0407 Adult retinal GCTGATGCTC (5) 1.9 0.0019 ONL AGGAAGGCGG (5) 36.4 0.0364 ONL CCTTCTCCTT (7) 1.9 0.0019 ONL GCTGATGCTC (5) 1.9 0.0019