Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.214525
Cnot4
CCR4-NOT transcription complex, subunit 4
6
6 B1
53621
Mm.214525
AL118003
expressed sequence AL118003
6
404558
Mm.214525
A230071A22Rik
RIKEN cDNA A230071A22 gene
6
320380
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 10 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 76 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGATAAAAGT
(
5
)
13.1
0.0131
P8 Cb GC
GGGGGAAGCA (
8
)
9.8
0.0098
P8 Cb GC
AGCATTCTGG (
5
)
8.2
0.0082
P8 Cb GC
GAGCCCCTGG
(
5
)
1.6
0.0016
P8 Cb GC
GTTCTTTCCT (
6
)
1.6
0.0016
Cb medulloblastoma
TGATAAAAGT
(
5
)
16.2
0.0162
P8 GC+1d culture
TGATAAAAGT
(
5
)
22.8
0.0228
P8 GC+1d culture
GTTCTTTCCT (
6
)
9.1
0.0091
P8 GC+1d culture
AGCATTCTGG (
5
)
6.8
0.0068
P8 GC+1d culture
GGGGGAAGCA (
8
)
4.6
0.0046
P8 GC+1d culture
GGGGAAAGCA
(
6
)
1.1
0.0011
P8 GC+1d culture
TACATCTGTG (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
TGATAAAAGT
(
5
)
19.9
0.0199
P8 GC+SHH+1d culture
AGCATTCTGG (
5
)
12.9
0.0129
P8 GC+SHH+1d culture
GGGGGAAGCA (
8
)
12.9
0.0129
P8 GC+SHH+1d culture
GTTCTTTCCT (
6
)
5.9
0.0059
P8 GC+SHH+1d culture
GAGCCCCTGG
(
5
)
3.5
0.0035
3T3 fibroblasts
AGCATTCTGG (
5
)
14
0.014
3T3 fibroblasts
GAGCCCCTGG
(
5
)
3.5
0.0035
3T3 fibroblasts
GGGGAAAGCA
(
6
)
3.5
0.0035
3T3 fibroblasts
TACATCTGTG (
6
)
3.5
0.0035
P1 cortex
TGATAAAAGT
(
5
)
18.2
0.0182
P1 cortex
AGCATTCTGG (
5
)
4.5
0.0045
P1 cortex
GAGCCCCTGG
(
5
)
4.5
0.0045
P1 cortex
TACATCTGTG (
6
)
4.5
0.0045
Hypothalamus
TGATAAAAGT
(
5
)
23.5
0.0235
Hypothalamus
GGGGGAAGCA (
8
)
1.8
0.0018
Hypothalamus
GTTCTTTCCT (
6
)
1.8
0.0018
E12.5 retina
AGCATTCTGG (
5
)
5.6
0.0056
E12.5 retina
GGGGGAAGCA (
8
)
5.6
0.0056
E12.5 retina
GTTCTTTCCT (
6
)
3.8
0.0038
E14.5 retina
GGGGGAAGCA (
8
)
5.5
0.0055
E14.5 retina
AGCATTCTGG (
5
)
3.6
0.0036
E14.5 retina
GTTCTTTCCT (
6
)
3.6
0.0036
E14.5 retina
TGATAAAAGT
(
5
)
3.6
0.0036
E14.5 retina
GAGCCCCTGG
(
5
)
1.8
0.0018
E16.5 retina
AGCATTCTGG (
5
)
5.4
0.0054
E16.5 retina
GTTCTTTCCT (
6
)
3.6
0.0036
E16.5 retina
TGATAAAAGT
(
5
)
3.6
0.0036
E16.5 retina
GGGGGAAGCA (
8
)
1.8
0.0018
E18.5 retina
GGGGGAAGCA (
8
)
12.7
0.0127
E18.5 retina
TGATAAAAGT
(
5
)
7.3
0.0073
E18.5 retina
AGCATTCTGG (
5
)
1.8
0.0018
P0.5 retina
AGCATTCTGG (
5
)
5.9
0.0059
P0.5 retina
GGGGGAAGCA (
8
)
5.9
0.0059
P0.5 retina
GAGCCCCTGG
(
5
)
2
0.002
P2.5 retina
TGATAAAAGT
(
5
)
19.4
0.0194
P2.5 retina
GGGGGAAGCA (
8
)
12.3
0.0123
P2.5 retina
GTTCTTTCCT (
6
)
10.6
0.0106
P2.5 retina
AGCATTCTGG (
5
)
3.5
0.0035
P2.5 retina
GAGCCCCTGG
(
5
)
1.8
0.0018
P2.5 retina
TACATCTGTG (
6
)
1.8
0.0018
P4.5 retina
TGATAAAAGT
(
5
)
23.8
0.0238
P4.5 retina
GGGGGAAGCA (
8
)
7.9
0.0079
P4.5 retina
AGCATTCTGG (
5
)
2
0.002
P4.5 retina
GTTCTTTCCT (
6
)
2
0.002
P6.5 retina
TGATAAAAGT
(
5
)
18.3
0.0183
P6.5 retina
AGCATTCTGG (
5
)
3.3
0.0033
P6.5 retina
GGGGGAAGCA (
8
)
3.3
0.0033
P6.5 retina
GTTCTTTCCT (
6
)
3.3
0.0033
P6.5 retina
GGGGAAAGCA
(
6
)
1.7
0.0017
P6.5 retina
TACATCTGTG (
6
)
1.7
0.0017
P10.5 crx- retina
GGGGGAAGCA (
8
)
11.1
0.0111
P10.5 crx- retina
TACATCTGTG (
6
)
7.4
0.0074
P10.5 crx- retina
TGATAAAAGT
(
5
)
5.6
0.0056
P10.5 crx- retina
AGCATTCTGG (
5
)
3.7
0.0037
P10.5 crx+ retina
TGATAAAAGT
(
5
)
17.3
0.0173
P10.5 crx+ retina
AGCATTCTGG (
5
)
3.8
0.0038
P10.5 crx+ retina
GGGGGAAGCA (
8
)
3.8
0.0038
P10.5 crx+ retina
GTTCTTTCCT (
6
)
3.8
0.0038
Adult retinal
TGATAAAAGT
(
5
)
9.3
0.0093
Adult retinal
GGGGAAAGCA
(
6
)
3.7
0.0037
Adult retinal
GGGGGAAGCA (
8
)
3.7
0.0037
ONL
GGGGGAAGCA (
8
)
3.8
0.0038
ONL
GAGCCCCTGG
(
5
)
1.9
0.0019
ONL
TACATCTGTG (
6
)
1.9
0.0019
