Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.214530	Igsf9	immunoglobulin superfamily, member 9	1	1 (1 94.0 cM)	93842
Gene Ontology	dendrite | dendrite morphogenesis | extracellular space | integral to membrane
Human Homolog	IGSF9[immunoglobulin superfamily, member 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 8 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACACACACA (106) 11.4 0.0114 P8 Cb GC GTGTGCCCCC (3) 1.6 0.0016 Cb medulloblastoma CACACACACA (106) 32.4 0.0324 P8 GC+1d culture CACACACACA (106) 6.8 0.0068 P8 GC+1d culture GTGTGCCCCC (3) 2.3 0.0023 P8 GC+SHH+1d culture CACACACACA (106) 9.4 0.0094 P8 GC+SHH+1d culture GTGTGCCCCC (3) 4.7 0.0047 P8 GC+SHH+1d culture TGGTGACAGT (4) 1.2 0.0012 3T3 fibroblasts CACACACACA (106) 17.5 0.0175 3T3 fibroblasts GTGTGCCCCC (3) 14 0.014 E15 cortex CTGCCGGCCC (4) 14.8 0.0148 E15 cortex CACACACACA (106) 4.9 0.0049 P1 cortex CACACACACA (106) 27.3 0.0273 P1 cortex CTGCCGGCCC (4) 4.5 0.0045 P1 cortex GTGTGCCCCC (3) 4.5 0.0045 Hypothalamus CACACACACA (106) 96 0.096 Hypothalamus GTGTGCCCCC (3) 3.6 0.0036 E12.5 retina CTGCCGGCCC (4) 5.6 0.0056 E12.5 retina CACACACACA (106) 3.8 0.0038 E12.5 retina GTGTGCCCCC (3) 1.9 0.0019 E14.5 retina CACACACACA (106) 18.2 0.0182 E14.5 retina AATCGTGGGA 1.8 0.0018 E14.5 retina CTGCCGGCCC (4) 1.8 0.0018 E16.5 retina CACACACACA (106) 12.7 0.0127 E16.5 retina CTGCCGGCCC (4) 3.6 0.0036 E16.5 retina AATCGTGGGA 1.8 0.0018 E18.5 retina CACACACACA (106) 5.5 0.0055 E18.5 retina CTGCCGGCCC (4) 3.6 0.0036 E18.5 retina AATCGTGGGA 1.8 0.0018 E18.5 retina GTGTGCCCCC (3) 1.8 0.0018 P0.5 retina CTGCCGGCCC (4) 11.8 0.0118 P0.5 retina CACACACACA (106) 7.9 0.0079 P0.5 retina GTGTGCCCCC (3) 7.9 0.0079 P2.5 retina CACACACACA (106) 21.1 0.0211 P4.5 retina CACACACACA (106) 7.9 0.0079 P4.5 retina GTGTGCCCCC (3) 2 0.002 P6.5 retina CACACACACA (106) 8.3 0.0083 P6.5 retina GTGTGCCCCC (3) 3.3 0.0033 P6.5 retina CTGCCGGCCC (4) 1.7 0.0017 P10.5 crx- retina CACACACACA (106) 5.6 0.0056 P10.5 crx- retina GTGTGCCCCC (3) 3.7 0.0037 P10.5 crx- retina AATCGTGGGA 1.9 0.0019 P10.5 crx- retina GAGCTGCTAG 1.9 0.0019 P10.5 crx+ retina CACACACACA (106) 7.7 0.0077 P10.5 crx+ retina GAGCTGCTAG 3.8 0.0038 P10.5 crx+ retina GTGTGCCCCC (3) 3.8 0.0038 P10.5 crx+ retina AATCGTGGGA 1.9 0.0019 P10.5 crx+ retina TGGTGACAGT (4) 1.9 0.0019 Adult retinal CACACACACA (106) 16.7 0.0167 Adult retinal CTGCCGGCCC (4) 11.1 0.0111 Adult retinal GTGTGCCCCC (3) 3.7 0.0037 Adult retinal AATCGTGGGA 1.9 0.0019 Adult retinal TGGTGACAGT (4) 1.9 0.0019 ONL CACACACACA (106) 21.1 0.0211 ONL GTGTGCCCCC (3) 3.8 0.0038 ONL CTGCCGGCCC (4) 1.9 0.0019