Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.214569
Phax
phosphorylated adaptor for RNA export
18
56698
Mm.214569
D18Ertd65e
DNA segment, Chr 18, ERATO Doi 65, expressed
18
18 29.0 cM
52470
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
P8 Cb GC
TAAAAAAAAA (
196
)
47.3
0.0473
P8 Cb GC
GTGACAAAAA
(
11
)
3.3
0.0033
P8 Cb GC
CTTATGGTGG
(
2
)
1.6
0.0016
P8 Cb GC
TGGACTCCAG
(
3
)
1.6
0.0016
Cb medulloblastoma
TAAAAAAAAA (
196
)
106.4
0.1064
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
Cb medulloblastoma
GTGACAAAAA
(
11
)
4.6
0.0046
P8 GC+1d culture
TAAAAAAAAA (
196
)
66.2
0.0662
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+SHH+1d culture
TAAAAAAAAA (
196
)
93.7
0.0937
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
GTGACAAAAA
(
11
)
1.2
0.0012
3T3 fibroblasts
TAAAAAAAAA (
196
)
7
0.007
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
E15 cortex
TAAAAAAAAA (
196
)
9.9
0.0099
P1 cortex
TAAAAAAAAA (
196
)
50
0.05
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
Hypothalamus
TAAAAAAAAA (
196
)
32.6
0.0326
Hypothalamus
TGGACTCCAG
(
3
)
1.8
0.0018
E12.5 retina
TAAAAAAAAA (
196
)
24.4
0.0244
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E12.5 retina
GTGACAAAAA
(
11
)
5.6
0.0056
E14.5 retina
TAAAAAAAAA (
196
)
41.9
0.0419
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E14.5 retina
GTGACAAAAA
(
11
)
1.8
0.0018
E16.5 retina
TAAAAAAAAA (
196
)
23.5
0.0235
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E18.5 retina
TAAAAAAAAA (
196
)
107.3
0.1073
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
TGGACTCCAG
(
3
)
3.6
0.0036
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
TAAAAAAAAA (
196
)
37.3
0.0373
P0.5 retina
CTTATGGTGG
(
2
)
2
0.002
P2.5 retina
TAAAAAAAAA (
196
)
72.2
0.0722
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P2.5 retina
GTGACAAAAA
(
11
)
1.8
0.0018
P4.5 retina
TAAAAAAAAA (
196
)
122.8
0.1228
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P4.5 retina
GTGACAAAAA
(
11
)
5.9
0.0059
P6.5 retina
TAAAAAAAAA (
196
)
63.4
0.0634
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
TAAAAAAAAA (
196
)
9.3
0.0093
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
TAAAAAAAAA (
196
)
25
0.025
P10.5 crx+ retina
GTGACAAAAA
(
11
)
1.9
0.0019
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
TAAAAAAAAA (
196
)
18.5
0.0185
Adult retinal
CTTATGGTGG
(
2
)
1.9
0.0019
ONL
TAAAAAAAAA (
196
)
28.7
0.0287
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
