Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.215389	Trp53bp1	transformation related protein 53 binding protein 1	2		27223
Gene Ontology	damaged DNA binding | kinetochore | nucleus | protein binding | regulation of transcription, DNA-dependent | transcription factor binding
Human Homolog	TP53BP1[tumor protein p53 binding protein, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTGAGAAT (3) 35.9 0.0359 P8 Cb GC GTGACTCACA (25) 14.7 0.0147 P8 Cb GC ATTATTTTTC (2) 3.3 0.0033 P8 Cb GC GACCTTGTAC 3.3 0.0033 P8 Cb GC CCAAACCAAA (2) 1.6 0.0016 P8 Cb GC TGTTGAGAAT (3) 1.6 0.0016 Cb medulloblastoma TGCTGAGAAT (3) 71.7 0.0717 Cb medulloblastoma GTGACTCACA (25) 25.4 0.0254 Cb medulloblastoma CCAAACCAAA (2) 2.3 0.0023 Cb medulloblastoma GGAAAGTTCT (2) 2.3 0.0023 Cb medulloblastoma TGGTGAGAGG (2) 2.3 0.0023 Cb medulloblastoma TGTTGAGAAT (3) 2.3 0.0023 P8 GC+1d culture TGCTGAGAAT (3) 41.1 0.0411 P8 GC+1d culture GTGACTCACA (25) 14.8 0.0148 P8 GC+1d culture GACCTTGTAC 5.7 0.0057 P8 GC+1d culture CCAAACCAAA (2) 1.1 0.0011 P8 GC+1d culture GGAAAGTTCT (2) 1.1 0.0011 P8 GC+SHH+1d culture TGCTGAGAAT (3) 39.8 0.0398 P8 GC+SHH+1d culture GTGACTCACA (25) 16.4 0.0164 P8 GC+SHH+1d culture GACCTTGTAC 5.9 0.0059 P8 GC+SHH+1d culture ATTATTTTTC (2) 2.3 0.0023 P8 GC+SHH+1d culture ATCTCTACTT (2) 1.2 0.0012 P8 GC+SHH+1d culture CCAAACCAAA (2) 1.2 0.0012 3T3 fibroblasts GTGACTCACA (25) 35 0.035 3T3 fibroblasts TGCTGAGAAT (3) 14 0.014 E15 cortex TGCTGAGAAT (3) 39.6 0.0396 E15 cortex GTGACTCACA (25) 19.8 0.0198 E15 cortex AGCCAACCCA (4) 9.9 0.0099 P1 cortex GTGACTCACA (25) 13.6 0.0136 P1 cortex TGCTGAGAAT (3) 13.6 0.0136 P1 cortex TGGTGAGAGG (2) 9.1 0.0091 P1 cortex ATCTCTACTT (2) 4.5 0.0045 Hypothalamus GTGACTCACA (25) 21.7 0.0217 Hypothalamus TGCTGAGAAT (3) 18.1 0.0181 Hypothalamus CCAAACCAAA (2) 1.8 0.0018 Hypothalamus GACCTTGTAC 1.8 0.0018 Hypothalamus TAACCCAGGC (8) 1.8 0.0018 Hypothalamus TGGTGAGAGG (2) 1.8 0.0018 E12.5 retina TGCTGAGAAT (3) 52.6 0.0526 E12.5 retina GTGACTCACA (25) 35.7 0.0357 E12.5 retina GACCTTGTAC 7.5 0.0075 E12.5 retina AGGGGTCTGT (2) 3.8 0.0038 E14.5 retina TGCTGAGAAT (3) 61.9 0.0619 E14.5 retina GTGACTCACA (25) 45.5 0.0455 E14.5 retina AGGGGTCTGT (2) 1.8 0.0018 E16.5 retina TGCTGAGAAT (3) 47.1 0.0471 E16.5 retina GTGACTCACA (25) 29 0.029 E16.5 retina GACCTTGTAC 3.6 0.0036 E16.5 retina ATCTCTACTT (2) 1.8 0.0018 E18.5 retina TGCTGAGAAT (3) 80 0.08 E18.5 retina GTGACTCACA (25) 27.3 0.0273 E18.5 retina GACCTTGTAC 7.3 0.0073 E18.5 retina CCAAACCAAA (2) 1.8 0.0018 P0.5 retina TGCTGAGAAT (3) 66.7 0.0667 P0.5 retina GTGACTCACA (25) 29.4 0.0294 P0.5 retina GACCTTGTAC 7.9 0.0079 P0.5 retina AGGGGTCTGT (2) 2 0.002 P0.5 retina ATCTCTACTT (2) 2 0.002 P0.5 retina CCAAACCAAA (2) 2 0.002 P0.5 retina TGGTGAGAGG (2) 2 0.002 P2.5 retina TGCTGAGAAT (3) 100.3 0.1003 P2.5 retina GTGACTCACA (25) 24.6 0.0246 P2.5 retina GACCTTGTAC 7 0.007 P2.5 retina AGGGGTCTGT (2) 1.8 0.0018 P2.5 retina ATCTCTACTT (2) 1.8 0.0018 P2.5 retina TGGTGAGAGG (2) 1.8 0.0018 P4.5 retina TGCTGAGAAT (3) 114.9 0.1149 P4.5 retina GTGACTCACA (25) 27.7 0.0277 P4.5 retina GACCTTGTAC 7.9 0.0079 P4.5 retina ATCTCTACTT (2) 2 0.002 P4.5 retina CCAAACCAAA (2) 2 0.002 P6.5 retina TGCTGAGAAT (3) 95 0.095 P6.5 retina GTGACTCACA (25) 26.7 0.0267 P6.5 retina GACCTTGTAC 6.7 0.0067 P6.5 retina CCAAACCAAA (2) 3.3 0.0033 P6.5 retina GGAAAGTTCT (2) 1.7 0.0017 P6.5 retina TGGTGAGAGG (2) 1.7 0.0017 P10.5 crx- retina TGCTGAGAAT (3) 52 0.052 P10.5 crx- retina GTGACTCACA (25) 26 0.026 P10.5 crx- retina GACCTTGTAC 5.6 0.0056 P10.5 crx- retina GGAAAGTTCT (2) 5.6 0.0056 P10.5 crx- retina TAACCCAGGC (8) 3.7 0.0037 P10.5 crx- retina AGCCAACCCA (4) 1.9 0.0019 P10.5 crx- retina CCAAACCAAA (2) 1.9 0.0019 P10.5 crx- retina TGTTGAGAAT (3) 1.9 0.0019 P10.5 crx+ retina TGCTGAGAAT (3) 105.7 0.1057 P10.5 crx+ retina GTGACTCACA (25) 30.8 0.0308 P10.5 crx+ retina TGGTGAGAGG (2) 3.8 0.0038 P10.5 crx+ retina CCAAACCAAA (2) 1.9 0.0019 P10.5 crx+ retina GACCTTGTAC 1.9 0.0019 P10.5 crx+ retina GGAAAGTTCT (2) 1.9 0.0019 Adult retinal TGCTGAGAAT (3) 40.7 0.0407 Adult retinal GTGACTCACA (25) 33.3 0.0333 Adult retinal TGGTGAGAGG (2) 9.3 0.0093 Adult retinal CGCATACACA (3) 7.4 0.0074 Adult retinal AGGGGTCTGT (2) 3.7 0.0037 Adult retinal TGTTGAGAAT (3) 1.9 0.0019 ONL TGCTGAGAAT (3) 46 0.046 ONL GTGACTCACA (25) 34.5 0.0345 ONL TGGTGAGAGG (2) 11.5 0.0115 ONL GACCTTGTAC 3.8 0.0038 ONL ATCTCTACTT (2) 1.9 0.0019