Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.215471
BC002199
cDNA sequence BC002199
3
211556
Human Homolog
C4orf16[chromosome 4 open reading frame 16]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTCTGCT
(
4
)
8.2
0.0082
P8 Cb GC
GAGATAATTT (
4
)
8.2
0.0082
Cb medulloblastoma
GAGATAATTT (
4
)
6.9
0.0069
Cb medulloblastoma
CCTTTCTGCT
(
4
)
2.3
0.0023
P8 GC+1d culture
CCTTTCTGCT
(
4
)
4.6
0.0046
P8 GC+1d culture
GAGATAATTT (
4
)
4.6
0.0046
P8 GC+1d culture
GAAATAATTT
(
4
)
2.3
0.0023
P8 GC+1d culture
CTTTCAACAG
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTCTGCT
(
4
)
5.9
0.0059
P8 GC+SHH+1d culture
GAGATAATTT (
4
)
4.7
0.0047
Hypothalamus
GAGATAATTT (
4
)
18.1
0.0181
Hypothalamus
CCTTTCTGCT
(
4
)
1.8
0.0018
Hypothalamus
GAAATAATTT
(
4
)
1.8
0.0018
E12.5 retina
CCTTTCTGCT
(
4
)
3.8
0.0038
E12.5 retina
GAGATAATTT (
4
)
1.9
0.0019
E14.5 retina
GAGATAATTT (
4
)
9.1
0.0091
E14.5 retina
CCTTTCTGCT
(
4
)
5.5
0.0055
E14.5 retina
GAAATAATTT
(
4
)
3.6
0.0036
E14.5 retina
CTTTCAACAG
1.8
0.0018
E16.5 retina
CCTTTCTGCT
(
4
)
7.2
0.0072
E16.5 retina
GAGATAATTT (
4
)
7.2
0.0072
E16.5 retina
CTTTCAACAG
1.8
0.0018
E18.5 retina
GAGATAATTT (
4
)
7.3
0.0073
E18.5 retina
CCTTTCTGCT
(
4
)
1.8
0.0018
P0.5 retina
CCTTTCTGCT
(
4
)
7.9
0.0079
P0.5 retina
GAGATAATTT (
4
)
5.9
0.0059
P0.5 retina
CTTTCAACAG
3.9
0.0039
P0.5 retina
GAAATAATTT
(
4
)
2
0.002
P2.5 retina
GAGATAATTT (
4
)
12.3
0.0123
P2.5 retina
CCTTTCTGCT
(
4
)
3.5
0.0035
P2.5 retina
GAAATAATTT
(
4
)
1.8
0.0018
P4.5 retina
GAGATAATTT (
4
)
11.9
0.0119
P4.5 retina
GAAATAATTT
(
4
)
5.9
0.0059
P4.5 retina
CCTTTCTGCT
(
4
)
4
0.004
P6.5 retina
GAGATAATTT (
4
)
8.3
0.0083
P6.5 retina
CCTTTCTGCT
(
4
)
3.3
0.0033
P6.5 retina
GAAATAATTT
(
4
)
3.3
0.0033
P10.5 crx- retina
GAGATAATTT (
4
)
16.7
0.0167
P10.5 crx- retina
CCTTTCTGCT
(
4
)
5.6
0.0056
P10.5 crx- retina
GAAATAATTT
(
4
)
1.9
0.0019
P10.5 crx+ retina
GAGATAATTT (
4
)
11.5
0.0115
P10.5 crx+ retina
CCTTTCTGCT
(
4
)
9.6
0.0096
Adult retinal
GAGATAATTT (
4
)
5.6
0.0056
Adult retinal
CCTTTCTGCT
(
4
)
1.9
0.0019
ONL
CCTTTCTGCT
(
4
)
3.8
0.0038
