Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21577	BC040823	cDNA sequence BC040823	2		241846
Human Homolog	C20orf40[chromosome 20 open reading frame 40]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTAAAATA (4) 6.5 0.0065 P8 Cb GC CAACAAATTT (3) 3.3 0.0033 Cb medulloblastoma ATACATTTTA (4) 2.3 0.0023 P8 GC+1d culture GCCTAAAATA (4) 3.4 0.0034 P8 GC+1d culture CATCCTCTGA 2.3 0.0023 P8 GC+1d culture CAACAAATTT (3) 1.1 0.0011 P8 GC+1d culture TTGTGTAATG 1.1 0.0011 P8 GC+SHH+1d culture GCCTAAAATA (4) 9.4 0.0094 P8 GC+SHH+1d culture CATCCTCTGA 2.3 0.0023 P8 GC+SHH+1d culture TTCTGAGATT (4) 2.3 0.0023 E15 cortex CATCCTCTGA 24.7 0.0247 P1 cortex CATCCTCTGA 4.5 0.0045 Hypothalamus CAACAAATTT (3) 1.8 0.0018 E12.5 retina CATCCTCTGA 9.4 0.0094 E14.5 retina CATCCTCTGA 7.3 0.0073 E14.5 retina CAACAAATTT (3) 3.6 0.0036 E14.5 retina TTGTGTAATG 1.8 0.0018 E16.5 retina CATCCTCTGA 5.4 0.0054 E16.5 retina CAACAAATTT (3) 1.8 0.0018 E18.5 retina CAACAAATTT (3) 1.8 0.0018 E18.5 retina TTGTGTAATG 1.8 0.0018 P0.5 retina CATCCTCTGA 5.9 0.0059 P2.5 retina CATCCTCTGA 7 0.007 P2.5 retina TTGTGTAATG 1.8 0.0018 P4.5 retina ATACATTTTA (4) 2 0.002 P4.5 retina CATCCTCTGA 2 0.002 P4.5 retina TTGTGTAATG 2 0.002 P6.5 retina CATCCTCTGA 1.7 0.0017 P6.5 retina TTGTGTAATG 1.7 0.0017 P10.5 crx- retina GCCTAAAATA (4) 14.9 0.0149 P10.5 crx- retina TTCTGAGATT (4) 1.9 0.0019 P10.5 crx+ retina GCCTAAAATA (4) 3.8 0.0038 Adult retinal CATCCTCTGA 3.7 0.0037