Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.216217
2900037P16Rik
RIKEN cDNA 2900037P16 gene
16
78338
Mm.216217
2900011O08Rik
RIKEN cDNA 2900011O08 gene
16
67254
Human Homolog
BC008967[hypothetical gene BC008967]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGCGGAGCT (
7
)
19.6
0.0196
Cb medulloblastoma
GGGCGGAGCT (
7
)
23.1
0.0231
Cb medulloblastoma
GACCTGAAGC (
5
)
4.6
0.0046
P8 GC+1d culture
GGGCGGAGCT (
7
)
78.8
0.0788
P8 GC+1d culture
GACCTGAAGC (
5
)
5.7
0.0057
P8 GC+1d culture
CTGCCACTGA (
3
)
1.1
0.0011
P8 GC+1d culture
CTTCATATTT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGCGGAGCT (
7
)
65.6
0.0656
P8 GC+SHH+1d culture
GACCTGAAGC (
5
)
4.7
0.0047
P8 GC+SHH+1d culture
CCCAGCCCAC
(
6
)
2.3
0.0023
3T3 fibroblasts
GGGCGGAGCT (
7
)
94.6
0.0946
3T3 fibroblasts
ATGCCAGAGG
(
5
)
7
0.007
3T3 fibroblasts
GACCTGAAGC (
5
)
3.5
0.0035
E15 cortex
GACCTGAAGC (
5
)
9.9
0.0099
E15 cortex
CCCAGCCCAC
(
6
)
4.9
0.0049
E15 cortex
GGGCGGAGCT (
7
)
4.9
0.0049
P1 cortex
CCCAGCCCAC
(
6
)
4.5
0.0045
Hypothalamus
GGGCGGAGCT (
7
)
39.8
0.0398
Hypothalamus
CCCAGCCCAC
(
6
)
3.6
0.0036
Hypothalamus
GACCTGAAGC (
5
)
1.8
0.0018
E12.5 retina
GGGCGGAGCT (
7
)
43.2
0.0432
E12.5 retina
CTTCATATTT
(
2
)
1.9
0.0019
E12.5 retina
GACCTGAAGC (
5
)
1.9
0.0019
E14.5 retina
GGGCGGAGCT (
7
)
21.9
0.0219
E14.5 retina
GACCTGAAGC (
5
)
3.6
0.0036
E16.5 retina
GGGCGGAGCT (
7
)
16.3
0.0163
E16.5 retina
GACCTGAAGC (
5
)
5.4
0.0054
E16.5 retina
CCCAGCCCAC
(
6
)
3.6
0.0036
E16.5 retina
CTTCATATTT
(
2
)
3.6
0.0036
E18.5 retina
GGGCGGAGCT (
7
)
38.2
0.0382
E18.5 retina
GACCTGAAGC (
5
)
7.3
0.0073
E18.5 retina
CCCAGCCCAC
(
6
)
1.8
0.0018
E18.5 retina
CTTCATATTT
(
2
)
1.8
0.0018
P0.5 retina
GGGCGGAGCT (
7
)
41.2
0.0412
P0.5 retina
GACCTGAAGC (
5
)
7.9
0.0079
P2.5 retina
GGGCGGAGCT (
7
)
52.8
0.0528
P2.5 retina
CCCAGCCCAC
(
6
)
1.8
0.0018
P4.5 retina
GGGCGGAGCT (
7
)
25.8
0.0258
P4.5 retina
GACCTGAAGC (
5
)
5.9
0.0059
P6.5 retina
GGGCGGAGCT (
7
)
36.7
0.0367
P6.5 retina
CCCAGCCCAC
(
6
)
1.7
0.0017
P6.5 retina
CTTCATATTT
(
2
)
1.7
0.0017
P6.5 retina
GACCTGAAGC (
5
)
1.7
0.0017
P10.5 crx- retina
GGGCGGAGCT (
7
)
20.4
0.0204
P10.5 crx- retina
CCCAGCCCAC
(
6
)
5.6
0.0056
P10.5 crx- retina
GACCTGAAGC (
5
)
5.6
0.0056
P10.5 crx- retina
CTGCCACTGA (
3
)
3.7
0.0037
P10.5 crx+ retina
GGGCGGAGCT (
7
)
32.7
0.0327
P10.5 crx+ retina
GACCTGAAGC (
5
)
5.8
0.0058
P10.5 crx+ retina
ATGCCAGAGG
(
5
)
1.9
0.0019
Adult retinal
GGGCGGAGCT (
7
)
18.5
0.0185
Adult retinal
CCCAGCCCAC
(
6
)
7.4
0.0074
Adult retinal
GACCTGAAGC (
5
)
3.7
0.0037
ONL
GGGCGGAGCT (
7
)
11.5
0.0115
ONL
GACCTGAAGC (
5
)
3.8
0.0038
ONL
CCCAGCCCAC
(
6
)
1.9
0.0019
