Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.216590
9330186A19Rik
RIKEN cDNA 9330186A19 gene
5
320365
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 93 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GATGACACCA (
4
)
120.7
0.1207
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
P8 Cb GC
GATTTTATTT
(
5
)
16.3
0.0163
P8 Cb GC
GAGCTGGTGA (
8
)
4.9
0.0049
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
Cb medulloblastoma
GATGACACCA (
4
)
13.9
0.0139
Cb medulloblastoma
GATTTTATTT
(
5
)
13.9
0.0139
Cb medulloblastoma
GAGCTGGTGA (
8
)
2.3
0.0023
P8 GC+1d culture
GATGACACCA (
4
)
122.1
0.1221
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GATTTTATTT
(
5
)
14.8
0.0148
P8 GC+1d culture
GAGCTGGTGA (
8
)
12.6
0.0126
P8 GC+SHH+1d culture
GATGACACCA (
4
)
97.2
0.0972
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
P8 GC+SHH+1d culture
GATTTTATTT
(
5
)
28.1
0.0281
P8 GC+SHH+1d culture
GAGCTGGTGA (
8
)
4.7
0.0047
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
TTCTCCTGCT (
6
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
GATGACACCA (
4
)
24.7
0.0247
E15 cortex
GATTTTATTT
(
5
)
9.9
0.0099
E15 cortex
GAGCTGGTGA (
8
)
4.9
0.0049
E15 cortex
GTGGTTTACA
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
P1 cortex
GATGACACCA (
4
)
54.5
0.0545
P1 cortex
GATTTTATTT
(
5
)
9.1
0.0091
P1 cortex
GTGGTTTACA
4.5
0.0045
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
GATGACACCA (
4
)
23.5
0.0235
Hypothalamus
GATTTTATTT
(
5
)
10.9
0.0109
Hypothalamus
GAGCTGGTGA (
8
)
5.4
0.0054
Hypothalamus
GTGGTTTACA
1.8
0.0018
Hypothalamus
TTCTCCTGCT (
6
)
1.8
0.0018
E12.5 retina
GATGACACCA (
4
)
193.4
0.1934
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
GAGCTGGTGA (
8
)
9.4
0.0094
E12.5 retina
GATTTTATTT
(
5
)
7.5
0.0075
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
GATGACACCA (
4
)
52.8
0.0528
E14.5 retina
GATTTTATTT
(
5
)
12.8
0.0128
E14.5 retina
GAGCTGGTGA (
8
)
1.8
0.0018
E14.5 retina
GCTGCTTTTT
(
5
)
1.8
0.0018
E14.5 retina
GTGGTTTACA
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
GATGACACCA (
4
)
76.1
0.0761
E16.5 retina
GAGCTGGTGA (
8
)
5.4
0.0054
E16.5 retina
GTGGTTTACA
5.4
0.0054
E16.5 retina
GATTTTATTT
(
5
)
3.6
0.0036
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
GATGACACCA (
4
)
58.2
0.0582
E18.5 retina
GATTTTATTT
(
5
)
20
0.02
E18.5 retina
GAGCTGGTGA (
8
)
1.8
0.0018
E18.5 retina
GTGGTTTACA
1.8
0.0018
E18.5 retina
TGATCTGTTG
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
GATGACACCA (
4
)
160.9
0.1609
P0.5 retina
GATTTTATTT
(
5
)
5.9
0.0059
P0.5 retina
GAGCTGGTGA (
8
)
2
0.002
P0.5 retina
GCTGCTTTTT
(
5
)
2
0.002
P0.5 retina
GTGGTTTACA
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P2.5 retina
GATGACACCA (
4
)
52.8
0.0528
P2.5 retina
GATTTTATTT
(
5
)
12.3
0.0123
P2.5 retina
GAGCTGGTGA (
8
)
7
0.007
P2.5 retina
TTCTCCTGCT (
6
)
1.8
0.0018
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
GATGACACCA (
4
)
67.4
0.0674
P4.5 retina
GATTTTATTT
(
5
)
13.9
0.0139
P4.5 retina
GAGCTGGTGA (
8
)
5.9
0.0059
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
GATGACACCA (
4
)
61.7
0.0617
P6.5 retina
GAGCTGGTGA (
8
)
8.3
0.0083
P6.5 retina
GATTTTATTT
(
5
)
5
0.005
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
GATGACACCA (
4
)
79.9
0.0799
P10.5 crx- retina
GATTTTATTT
(
5
)
18.6
0.0186
P10.5 crx- retina
GAGCTGGTGA (
8
)
13
0.013
P10.5 crx- retina
TGATCTGTTG
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
GATGACACCA (
4
)
48.1
0.0481
P10.5 crx+ retina
GATTTTATTT
(
5
)
5.8
0.0058
P10.5 crx+ retina
GAGCTGGTGA (
8
)
3.8
0.0038
P10.5 crx+ retina
GCTGCTTTTT
(
5
)
3.8
0.0038
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
GATGACACCA (
4
)
46.3
0.0463
Adult retinal
GATTTTATTT
(
5
)
3.7
0.0037
Adult retinal
GCTGCTTTTT
(
5
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
ONL
GATGACACCA (
4
)
28.7
0.0287
ONL
GATTTTATTT
(
5
)
9.6
0.0096
ONL
GAGCTGGTGA (
8
)
7.7
0.0077
ONL
GTGGTTTACA
5.7
0.0057
ONL
TGATCTGTTG
1.9
0.0019
