Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21662	Rpgrip1	retinitis pigmentosa GTPase regulator interacting protein 1	14	14 C1	77945
Gene Ontology	axoneme | cilium | eye photoreceptor cell development | protein binding | vision
Human Homolog	RPGRIP1[retinitis pigmentosa GTPase regulator interacting protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 96 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCATTCTTC (3) 1.6 0.0016 P8 Cb GC CACATTCTGG (2) 1.6 0.0016 P8 Cb GC GTGGAAGAGA (2) 1.6 0.0016 Cb medulloblastoma ACCATTCTTC (3) 4.6 0.0046 Cb medulloblastoma CACATTCTGG (2) 2.3 0.0023 P8 GC+1d culture GATCTCAAAG (3) 2.3 0.0023 P8 GC+1d culture ACCATTCTTC (3) 1.1 0.0011 P8 GC+1d culture TTGACTCCTT (3) 1.1 0.0011 P8 GC+SHH+1d culture GATCTCAAAG (3) 4.7 0.0047 P8 GC+SHH+1d culture CACATTCTGG (2) 3.5 0.0035 P8 GC+SHH+1d culture ACCATTCTTC (3) 1.2 0.0012 E15 cortex GATCTCAAAG (3) 4.9 0.0049 P1 cortex CACATTCTGG (2) 9.1 0.0091 P1 cortex ACCATTCTTC (3) 4.5 0.0045 P1 cortex TTGACTCCTT (3) 4.5 0.0045 Hypothalamus CCATAAAAAA (5) 1.8 0.0018 Hypothalamus GCTGCATAGC (3) 1.8 0.0018 Hypothalamus GGAGGCCTCC (6) 1.8 0.0018 E12.5 retina ACCATTCTTC (3) 3.8 0.0038 E12.5 retina GCTGCATAGC (3) 1.9 0.0019 E14.5 retina ACCATTCTTC (3) 1.8 0.0018 E14.5 retina GCTTACCTTG (6) 1.8 0.0018 E14.5 retina TCTGATGAGA 1.8 0.0018 E16.5 retina GCTGCATAGC (3) 5.4 0.0054 E16.5 retina CCATAAACCT (3) 1.8 0.0018 E18.5 retina GCTGCATAGC (3) 5.5 0.0055 E18.5 retina CACATTCTGG (2) 1.8 0.0018 E18.5 retina CCATAAAAAA (5) 1.8 0.0018 P0.5 retina GCTGCATAGC (3) 5.9 0.0059 P0.5 retina ACTTTTCTCA (2) 3.9 0.0039 P0.5 retina CACATTCTGG (2) 2 0.002 P0.5 retina CCATAAACCT (3) 2 0.002 P0.5 retina TCTGATGAGA 2 0.002 P2.5 retina GCTGCATAGC (3) 22.9 0.0229 P2.5 retina GATCTCAAAG (3) 5.3 0.0053 P2.5 retina ACCATTCTTC (3) 3.5 0.0035 P2.5 retina CACATTCTGG (2) 3.5 0.0035 P2.5 retina CCATAAAAAA (5) 3.5 0.0035 P2.5 retina CCATAAACCT (3) 3.5 0.0035 P2.5 retina CCCCGGGTCA 1.8 0.0018 P2.5 retina CTTCAGCCTT (2) 1.8 0.0018 P2.5 retina GCTTACCTTG (6) 1.8 0.0018 P2.5 retina TTGACTCCTT (3) 1.8 0.0018 P4.5 retina GCTGCATAGC (3) 43.6 0.0436 P4.5 retina ACCATTCTTC (3) 15.9 0.0159 P4.5 retina CCATAAACCT (3) 7.9 0.0079 P4.5 retina GATCTCAAAG (3) 5.9 0.0059 P4.5 retina CACATTCTGG (2) 4 0.004 P4.5 retina GGAGGCCTCC (6) 4 0.004 P4.5 retina AGGCAAGAAA (2) 2 0.002 P4.5 retina CCCCGGGTCA 2 0.002 P4.5 retina CTTCAGCCTT (2) 2 0.002 P4.5 retina GCTTAGACTC 2 0.002 P4.5 retina TTGACTCCTT (3) 2 0.002 P6.5 retina GCTGCATAGC (3) 45 0.045 P6.5 retina ACTTTTCTCA (2) 8.3 0.0083 P6.5 retina ACCATTCTTC (3) 6.7 0.0067 P6.5 retina CCATAAAAAA (5) 5 0.005 P6.5 retina CCATAAACCT (3) 3.3 0.0033 P6.5 retina GCTTACCTTG (6) 3.3 0.0033 P6.5 retina CACATTCTGG (2) 1.7 0.0017 P6.5 retina CTTCAGCCTT (2) 1.7 0.0017 P6.5 retina GTGGAAGAGA (2) 1.7 0.0017 P10.5 crx- retina GCTGCATAGC (3) 13 0.013 P10.5 crx- retina GATCTCAAAG (3) 3.7 0.0037 P10.5 crx- retina ACCATTCTTC (3) 1.9 0.0019 P10.5 crx- retina ACTTTTCTCA (2) 1.9 0.0019 P10.5 crx- retina AGGCAAGAAA (2) 1.9 0.0019 P10.5 crx- retina CCATAAAAAA (5) 1.9 0.0019 P10.5 crx- retina GCTTACCTTG (6) 1.9 0.0019 P10.5 crx- retina TCTGATGAGA 1.9 0.0019 P10.5 crx+ retina GCTGCATAGC (3) 80.7 0.0807 P10.5 crx+ retina CCATAAACCT (3) 13.5 0.0135 P10.5 crx+ retina ACCATTCTTC (3) 3.8 0.0038 P10.5 crx+ retina ACTTTTCTCA (2) 3.8 0.0038 P10.5 crx+ retina CCCCGGGTCA 3.8 0.0038 P10.5 crx+ retina AGGCAAGAAA (2) 1.9 0.0019 P10.5 crx+ retina CCATAAAAAA (5) 1.9 0.0019 P10.5 crx+ retina GCTTAGACTC 1.9 0.0019 Adult retinal GCTGCATAGC (3) 18.5 0.0185 Adult retinal ACTTTTCTCA (2) 9.3 0.0093 Adult retinal CCATAAACCT (3) 7.4 0.0074 Adult retinal ACCATTCTTC (3) 1.9 0.0019 Adult retinal CACATTCTGG (2) 1.9 0.0019 Adult retinal CCATAAAAAA (5) 1.9 0.0019 Adult retinal CTTCAGCCTT (2) 1.9 0.0019 Adult retinal GATCTCAAAG (3) 1.9 0.0019 ONL GCTGCATAGC (3) 23 0.023 ONL ACCATTCTTC (3) 3.8 0.0038 ONL CACATTCTGG (2) 3.8 0.0038 ONL GCTTAGACTC 3.8 0.0038 ONL ACTTTTCTCA (2) 1.9 0.0019 ONL CCATAAAAAA (5) 1.9 0.0019 ONL CCATAAACCT (3) 1.9 0.0019 ONL CTTCAGCCTT (2) 1.9 0.0019 ONL GTGGAAGAGA (2) 1.9 0.0019